Cow genome map
| Conread name: | rgul0120_e11.y1 |
| Conread position: | 1-180 |
| Cow position: | chr11:63986413-63986591 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 116 |
| Conread position: | 1-249 |
| Cow position: | chr11:86591066-86591301 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 189, 61 |
| Conread position: | 1-269 |
| Cow position: | chr11:81547331-81547599 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 131, 157 |
| Conread position: | 1-279 |
| Cow position: | chr11:2079245-2078971 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 104, 36 |
| Conread position: | 1-328 |
| Cow position: | chr11:20722085-20721755 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 96 |
| Conread position: | 2-297 |
| Cow position: | chr11:72953850-72953555 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 69, 95 |
| Conread position: | 2-328 |
| Cow position: | chr11:1296793-1296466 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 112 |
| Conread position: | 3-115 |
| Cow position: | chr11:63648125-63648013 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-269 |
| Cow position: | chr11:36164604-36164868 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 3-271 |
| Cow position: | chr11:39076113-39075859 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 4-185 |
| Cow position: | chr11:63990124-63990313 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 84 |
| Conread position: | 5-251 |
| Cow position: | chr11:63659156-63658904 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 99, 107 |
| Conread position: | 5-265 |
| Cow position: | chr11:33288854-33289104 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 5-269 |
| Cow position: | chr11:53783248-53782979 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 80 |
| Conread position: | 5-279 |
| Cow position: | chr11:1608527-1608261 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 5-320 |
| Cow position: | chr11:25541083-25540776 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 5-328 |
| Cow position: | chr11:82114751-82115070 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 9-265 |
| Cow position: | chr11:42120131-42120376 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 72, 76 |
| Conread position: | 22-321 |
| Cow position: | chr11:68450579-68450285 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 59, 93 |
| Conread position: | 47-213 |
| Cow position: | chr11:35647628-35647461 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 47-312 |
| Cow position: | chr11:10105510-10105796 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 217 |
| Conread position: | 83-265 |
| Cow position: | chr11:25651556-25651381 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 150-328 |
| Cow position: | chr11:47746340-47746522 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 175-328 |
| Cow position: | chr11:63986814-63986968 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
Show alignments to all cow chromosomes.