Cow genome map


           Conread name:
           rgul0120_e11.y1
        

               Conread position:
               1-174
               

               Cow position:
               chr12:4569205-4569031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr12:17647278-17647012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 72
               

               Conread position:
               1-328
               

               Cow position:
               chr12:414093-413768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               277, 29
               

               Conread position:
               5-264
               

               Cow position:
               chr12:7952729-7952998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               79, 182
               

               Conread position:
               9-254
               

               Cow position:
               chr12:26503419-26503182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               9-321
               

               Cow position:
               chr12:24553142-24552826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 82
               

               Conread position:
               14-334
               

               Cow position:
               chr12:13979980-13980293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 67
               

               Conread position:
               35-269
               

               Cow position:
               chr12:21955294-21955051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               128-303
               

               Cow position:
               chr12:42730563-42730398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               149, 77
               
Show alignments to all cow chromosomes.