Cow genome map
| Conread name: | rgul0120_e11.y1 |
| Conread position: | 1-251 |
| Cow position: | chr17:5904426-5904181 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 242, 29 |
| Conread position: | 1-251 |
| Cow position: | chr17:26774766-26775020 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 1-265 |
| Cow position: | chr17:27176583-27176310 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 68, 79 |
| Conread position: | 1-265 |
| Cow position: | chr17:27762257-27762518 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 77, 7 |
| Conread position: | 1-275 |
| Cow position: | chr17:906087-905815 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 82, 109 |
| Conread position: | 1-279 |
| Cow position: | chr17:8244087-8244359 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 167, 80 |
| Conread position: | 1-320 |
| Cow position: | chr17:27722369-27722055 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 83 |
| Conread position: | 1-328 |
| Cow position: | chr17:25103200-25102873 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 99 |
| Conread position: | 1-328 |
| Cow position: | chr17:35314367-35314708 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 142 |
| Conread position: | 4-163 |
| Cow position: | chr17:4526598-4526756 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 5-234 |
| Cow position: | chr17:1368787-1368554 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 83, 132 |
| Conread position: | 5-273 |
| Cow position: | chr17:23512527-23512798 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 5-280 |
| Cow position: | chr17:9316624-9316889 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 5-282 |
| Cow position: | chr17:3496202-3495929 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 120 |
| Conread position: | 5-282 |
| Cow position: | chr17:30472308-30472588 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 7-241 |
| Cow position: | chr17:21332172-21332397 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 9-242 |
| Cow position: | chr17:2028514-2028743 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 9-279 |
| Cow position: | chr17:40227690-40227951 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 20-270 |
| Cow position: | chr17:38154881-38154626 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 117, 241 |
| Conread position: | 39-327 |
| Cow position: | chr17:20827860-20828160 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 85, 298 |
| Conread position: | 43-249 |
| Cow position: | chr17:13455995-13455786 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 82, 66 |
| Conread position: | 77-319 |
| Cow position: | chr17:36072601-36072342 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 128-328 |
| Cow position: | chr17:20743636-20743838 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 151, 95 |
| Conread position: | 140-328 |
| Cow position: | chr17:25464016-25463830 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 137, 125 |
Show alignments to all cow chromosomes.