Cow genome map
| Conread name: | rgul0120_e11.y1 |
| Conread position: | 1-187 |
| Cow position: | chr2:39552067-39551881 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 182, 173 |
| Conread position: | 1-222 |
| Cow position: | chr2:36478957-36479168 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 1-308 |
| Cow position: | chr2:83592758-83592453 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 129, 70 |
| Conread position: | 1-328 |
| Cow position: | chr2:46011269-46011603 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 55 |
| Conread position: | 1-328 |
| Cow position: | chr2:78077458-78077790 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 129, 60 |
| Conread position: | 3-279 |
| Cow position: | chr2:32424714-32424988 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 189, 60 |
| Conread position: | 3-331 |
| Cow position: | chr2:46336527-46336195 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 187 |
| Conread position: | 4-213 |
| Cow position: | chr2:50881408-50881618 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 127, 86 |
| Conread position: | 5-178 |
| Cow position: | chr2:7880350-7880176 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 5-188 |
| Cow position: | chr2:39339393-39339209 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 5-225 |
| Cow position: | chr2:82122969-82123189 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 124, 78 |
| Conread position: | 5-234 |
| Cow position: | chr2:74696840-74697063 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 5-265 |
| Cow position: | chr2:51204207-51203944 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 190 |
| Conread position: | 5-268 |
| Cow position: | chr2:32643757-32643499 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 5-269 |
| Cow position: | chr2:12921872-12922127 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 5-269 |
| Cow position: | chr2:15560358-15560100 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 134, 110 |
| Conread position: | 5-269 |
| Cow position: | chr2:41273887-41273626 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 5-273 |
| Cow position: | chr2:15271667-15271931 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 5-273 |
| Cow position: | chr2:84150690-84150956 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 103 |
| Conread position: | 5-279 |
| Cow position: | chr2:42212779-42213055 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 5-320 |
| Cow position: | chr2:54452701-54452398 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 219, 75 |
| Conread position: | 5-327 |
| Cow position: | chr2:66127569-66127247 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 45 |
| Conread position: | 5-328 |
| Cow position: | chr2:1154438-1154146 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 216, 35 |
| Conread position: | 5-328 |
| Cow position: | chr2:63795399-63795713 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 91 |
| Conread position: | 7-269 |
| Cow position: | chr2:1631046-1630777 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 92, 74 |
| Conread position: | 8-279 |
| Cow position: | chr2:56035600-56035332 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 77 |
| Conread position: | 11-279 |
| Cow position: | chr2:75547662-75547396 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 22-258 |
| Cow position: | chr2:45907764-45907991 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 169, 105 |
| Conread position: | 45-331 |
| Cow position: | chr2:41041199-41041485 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 64-285 |
| Cow position: | chr2:39533448-39533231 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 79-335 |
| Cow position: | chr2:45779498-45779240 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 149, 49 |
| Conread position: | 129-328 |
| Cow position: | chr2:86200221-86200413 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 147, 41 |
| Conread position: | 135-269 |
| Cow position: | chr2:28674279-28674148 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 142-270 |
| Cow position: | chr2:78076216-78076343 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 143-327 |
| Cow position: | chr2:12915111-12915291 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 149, 48 |
| Conread position: | 197-335 |
| Cow position: | chr2:39551897-39551758 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.