Cow genome map


           Conread name:
           rgul0120_e11.y1
        

               Conread position:
               1-206
               

               Cow position:
               chr20:3865752-3865549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1-247
               

               Cow position:
               chr20:35869175-35868931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               71, 122
               

               Conread position:
               4-272
               

               Cow position:
               chr20:35169492-35169222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 169
               

               Conread position:
               5-266
               

               Cow position:
               chr20:14393546-14393800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               120, 92
               

               Conread position:
               5-269
               

               Cow position:
               chr20:39270588-39270847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               101, 7
               

               Conread position:
               10-269
               

               Cow position:
               chr20:23291873-23292129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               69, 61
               

               Conread position:
               42-303
               

               Cow position:
               chr20:24091356-24091627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               81-240
               

               Cow position:
               chr20:1411087-1411245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               83-250
               

               Cow position:
               chr20:14528276-14528446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 163
               

               Conread position:
               100-297
               

               Cow position:
               chr20:24023928-24023732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 8
               

               Conread position:
               124-328
               

               Cow position:
               chr20:23819654-23819857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               142, 12
               
Show alignments to all cow chromosomes.