Cow genome map
| Conread name: | rgul0120_e11.y1 |
| Conread position: | 1-182 |
| Cow position: | chr21:18153375-18153552 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-220 |
| Cow position: | chr21:17923978-17924195 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 1-240 |
| Cow position: | chr21:10277416-10277187 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-279 |
| Cow position: | chr21:17907464-17907747 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 7 |
| Conread position: | 1-328 |
| Cow position: | chr21:7780575-7780902 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 135 |
| Conread position: | 1-331 |
| Cow position: | chr21:3495209-3494878 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 129, 87 |
| Conread position: | 1-335 |
| Cow position: | chr21:35146812-35146485 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 2-269 |
| Cow position: | chr21:11362167-11361911 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-285 |
| Cow position: | chr21:24986507-24986787 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 122 |
| Conread position: | 5-273 |
| Cow position: | chr21:5644684-5644413 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 169 |
| Conread position: | 5-273 |
| Cow position: | chr21:19059039-19058766 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 30 |
| Conread position: | 5-275 |
| Cow position: | chr21:20029505-20029781 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 173 |
| Conread position: | 5-279 |
| Cow position: | chr21:25522195-25521933 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 5-285 |
| Cow position: | chr21:16513396-16513667 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 180, 82 |
| Conread position: | 5-321 |
| Cow position: | chr21:41100078-41099775 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 5-328 |
| Cow position: | chr21:7619436-7619095 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 125, 218 |
| Conread position: | 5-331 |
| Cow position: | chr21:5541997-5542318 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 109 |
| Conread position: | 5-331 |
| Cow position: | chr21:41591219-41591537 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 99 |
| Conread position: | 5-335 |
| Cow position: | chr21:5026781-5026475 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 266, 78 |
| Conread position: | 8-259 |
| Cow position: | chr21:14776117-14776366 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 8-269 |
| Cow position: | chr21:36812187-36812443 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 119, 132 |
| Conread position: | 12-279 |
| Cow position: | chr21:4755337-4755084 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 15-264 |
| Cow position: | chr21:249146-248891 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 72 |
| Conread position: | 22-279 |
| Cow position: | chr21:17991476-17991229 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 24-328 |
| Cow position: | chr21:35094466-35094772 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 16 |
| Conread position: | 28-231 |
| Cow position: | chr21:41102937-41103136 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 74 |
| Conread position: | 40-285 |
| Cow position: | chr21:42593263-42593028 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 123, 81 |
| Conread position: | 46-335 |
| Cow position: | chr21:10131061-10131338 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 140-269 |
| Cow position: | chr21:27565622-27565493 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 52, 42 |
Show alignments to all cow chromosomes.