Cow genome map
| Conread name: | rgul0120_e11.y1 |
| Conread position: | 1-228 |
| Cow position: | chr5:73176759-73176541 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-247 |
| Cow position: | chr5:20013967-20014203 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 216, 7 |
| Conread position: | 1-309 |
| Cow position: | chr5:63579817-63580121 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 1-326 |
| Cow position: | chr5:34182572-34182255 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 113 |
| Conread position: | 1-328 |
| Cow position: | chr5:49082795-49082471 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 79, 74 |
| Conread position: | 5-265 |
| Cow position: | chr5:65671005-65670749 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 153, 123 |
| Conread position: | 5-269 |
| Cow position: | chr5:44843703-44843428 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 5-309 |
| Cow position: | chr5:64172841-64173143 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 124 |
| Conread position: | 5-329 |
| Cow position: | chr5:4263402-4263093 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 76, 172 |
| Conread position: | 6-327 |
| Cow position: | chr5:7867863-7868180 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 64, 140 |
| Conread position: | 7-279 |
| Cow position: | chr5:7413859-7414113 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 30-279 |
| Cow position: | chr5:10885210-10884969 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 40-273 |
| Cow position: | chr5:53959199-53958971 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 109, 31 |
| Conread position: | 41-327 |
| Cow position: | chr5:63126093-63125807 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 45-269 |
| Cow position: | chr5:20744300-20744520 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 60, 69 |
| Conread position: | 47-266 |
| Cow position: | chr5:55349856-55349647 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 70-257 |
| Cow position: | chr5:20658813-20658625 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 96-258 |
| Cow position: | chr5:57408622-57408789 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 163-328 |
| Cow position: | chr5:47538785-47538619 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 108, 34 |
Show alignments to all cow chromosomes.