Cow genome map


           Conread name:
           rgul0127_e2.y1
        

               Conread position:
               102-349
               

               Cow position:
               chr1:61590446-61590686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               95, 28
               

               Conread position:
               112-285
               

               Cow position:
               chr1:61729510-61729678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               12, 68
               

               Conread position:
               113-347
               

               Cow position:
               chr1:13581250-13581474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               113-347
               

               Cow position:
               chr1:24653011-24652780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               82, 65
               

               Conread position:
               116-340
               

               Cow position:
               chr1:27112691-27112911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               118-347
               

               Cow position:
               chr1:46837366-46837141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               119-262
               

               Cow position:
               chr1:89482691-89482549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               78, 74
               

               Conread position:
               122-344
               

               Cow position:
               chr1:40436086-40436307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               129-300
               

               Cow position:
               chr1:33390005-33389841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               130-347
               

               Cow position:
               chr1:89732792-89732996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               66, 49
               
Show alignments to all cow chromosomes.