Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 63-327 |
| Cow position: | chr12:23498156-23498430 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 5, 35 |
| Conread position: | 63-547 |
| Cow position: | chr12:26311068-26310589 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 62 |
| Conread position: | 70-216 |
| Cow position: | chr12:12982835-12982686 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 70-324 |
| Cow position: | chr12:25513911-25514169 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 70-339 |
| Cow position: | chr12:29760609-29760338 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 219 |
| Conread position: | 70-506 |
| Cow position: | chr12:2838216-2837791 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 51 |
| Conread position: | 70-537 |
| Cow position: | chr12:16961633-16962095 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 71-362 |
| Cow position: | chr12:23892559-23892848 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 33 |
| Conread position: | 72-506 |
| Cow position: | chr12:10161930-10161478 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 166 |
| Conread position: | 72-506 |
| Cow position: | chr12:27423288-27423725 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 121 |
| Conread position: | 72-507 |
| Cow position: | chr12:33277939-33278379 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 335 |
| Conread position: | 75-506 |
| Cow position: | chr12:1993547-1993101 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 75-506 |
| Cow position: | chr12:21066233-21066683 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 35 |
| Conread position: | 124-517 |
| Cow position: | chr12:36975350-36974949 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 180 |
| Conread position: | 127-508 |
| Cow position: | chr12:8468100-8467722 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 141-506 |
| Cow position: | chr12:7025354-7024975 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 164 |
| Conread position: | 153-506 |
| Cow position: | chr12:18442783-18443130 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 192-508 |
| Cow position: | chr12:7936928-7936608 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 133 |
| Conread position: | 208-422 |
| Cow position: | chr12:33875683-33875473 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 209-504 |
| Cow position: | chr12:33277438-33277151 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 217-496 |
| Cow position: | chr12:8767451-8767174 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 221-373 |
| Cow position: | chr12:38632187-38632342 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 227-506 |
| Cow position: | chr12:28214288-28214561 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 233-505 |
| Cow position: | chr12:20227181-20226912 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 263-517 |
| Cow position: | chr12:11306412-11306156 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 5 |
| Conread position: | 291-508 |
| Cow position: | chr12:38223295-38223069 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 291-516 |
| Cow position: | chr12:5896818-5896591 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 303-512 |
| Cow position: | chr12:27718094-27718290 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 330-506 |
| Cow position: | chr12:12763916-12763742 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 342-542 |
| Cow position: | chr12:29759186-29758979 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 43 |
Show alignments to all cow chromosomes.