Cow genome map


           Conread name:
           rlin03_l3.y1
        

               Conread position:
               63-375
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 64
               

               Conread position:
               63-505
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-506
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 53
               

               Conread position:
               70-215
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-216
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               70-216
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-471
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 51
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 99
               

               Conread position:
               70-499
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 37
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 193
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               299
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               117, 52
               

               Conread position:
               72-506
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 31
               

               Conread position:
               75-506
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 25
               

               Conread position:
               80-542
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               335
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               106, 185
               

               Conread position:
               81-519
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 57
               

               Conread position:
               90-309
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 175
               

               Conread position:
               111-542
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 233
               

               Conread position:
               117-516
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 154
               

               Conread position:
               122-506
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 280
               

               Conread position:
               124-323
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 108
               

               Conread position:
               124-350
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 130
               

               Conread position:
               124-375
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               62, 206
               

               Conread position:
               125-488
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 62
               

               Conread position:
               134-542
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 86
               

               Conread position:
               136-358
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 86
               

               Conread position:
               145-506
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 122
               

               Conread position:
               166-503
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 143
               

               Conread position:
               168-375
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 134
               

               Conread position:
               177-460
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               178-499
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 156
               

               Conread position:
               207-433
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               207-447
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               207-506
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               207-530
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               61, 171
               

               Conread position:
               208-438
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               57, 178
               

               Conread position:
               208-441
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               208-505
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 184
               

               Conread position:
               208-506
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               208-509
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 164
               

               Conread position:
               208-537
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               70, 170
               

               Conread position:
               209-508
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               98, 35
               

               Conread position:
               210-522
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               243-504
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 130
               

               Conread position:
               250-517
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               258-433
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               47, 10
               

               Conread position:
               263-501
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               145, 91
               

               Conread position:
               263-547
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 5
               

               Conread position:
               264-508
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               268-504
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               278-506
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               290-516
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               15, 92
               

               Conread position:
               291-514
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               146, 49
               

               Conread position:
               298-506
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               305-506
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               311-504
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               124, 63
               

               Conread position:
               315-506
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               124, 61
               

               Conread position:
               317-504
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               117, 12
               

               Conread position:
               317-516
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 60
               

               Conread position:
               322-506
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 53
               

               Conread position:
               324-504
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               110, 58
               

               Conread position:
               331-506
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               341-506
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               109, 41
               

               Conread position:
               359-542
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               397-517
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 0
               
Show alignments to all cow chromosomes.