Cow genome map

Conread name: rlin03_l3.y1

Conread position: 63-375
Cow position: chr13:37497804-37498112 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 64

Conread position: 63-505
Cow position: chr13:34885037-34885495 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-506
Cow position: chr13:38535304-38534882 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 53

Conread position: 70-215
Cow position: chr13:46349584-46349732 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 70-216
Cow position: chr13:1367933-1367783 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 70-216
Cow position: chr13:43384712-43384862 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 70-471
Cow position: chr13:39487408-39487813 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 51

Conread position: 70-488
Cow position: chr13:55406742-55407165 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 99

Conread position: 70-499
Cow position: chr13:34931369-34931762 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 37

Conread position: 70-506
Cow position: chr13:12325187-12325602 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 193

Conread position: 70-506
Cow position: chr13:38362199-38361780 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 299
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 117, 52

Conread position: 72-506
Cow position: chr13:19115504-19115926 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 31

Conread position: 75-506
Cow position: chr13:46464735-46464308 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 25

Conread position: 80-542
Cow position: chr13:45497344-45497815 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 335
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 185

Conread position: 81-519
Cow position: chr13:34336353-34336769 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 57

Conread position: 90-309
Cow position: chr13:11441448-11441672 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 175

Conread position: 111-542
Cow position: chr13:34264980-34264554 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 233

Conread position: 117-516
Cow position: chr13:51240852-51241251 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 122-506
Cow position: chr13:47325775-47325382 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 280

Conread position: 124-323
Cow position: chr13:59997899-59997688 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 108

Conread position: 124-350
Cow position: chr13:9103773-9103547 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 130

Conread position: 124-375
Cow position: chr13:62271996-62271742 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 206

Conread position: 125-488
Cow position: chr13:24675801-24676162 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 62

Conread position: 134-542
Cow position: chr13:25955478-25955067 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 86

Conread position: 136-358
Cow position: chr13:30833978-30834196 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 86

Conread position: 145-506
Cow position: chr13:17169350-17169706 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 122

Conread position: 166-503
Cow position: chr13:44144242-44143895 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 143

Conread position: 168-375
Cow position: chr13:18839096-18839313 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 134

Conread position: 177-460
Cow position: chr13:26942985-26943280 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 79, 8

Conread position: 178-499
Cow position: chr13:24404186-24403861 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 156

Conread position: 207-433
Cow position: chr13:21826381-21826593 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 207-447
Cow position: chr13:43848879-43848642 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 39

Conread position: 207-506
Cow position: chr13:43803135-43803448 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 52

Conread position: 207-530
Cow position: chr13:20656543-20656876 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 171

Conread position: 208-438
Cow position: chr13:17127538-17127306 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 178

Conread position: 208-441
Cow position: chr13:46131798-46131567 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 33

Conread position: 208-505
Cow position: chr13:28605624-28605932 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 184

Conread position: 208-506
Cow position: chr13:7804067-7803761 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 49

Conread position: 208-509
Cow position: chr13:33239730-33240036 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 164

Conread position: 208-537
Cow position: chr13:15731349-15731029 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 70, 170

Conread position: 209-508
Cow position: chr13:26255508-26255208 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 35

Conread position: 210-522
Cow position: chr13:21878461-21878148 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 49

Conread position: 243-504
Cow position: chr13:51142759-51142503 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 130

Conread position: 250-517
Cow position: chr13:11223161-11222899 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 55, 117

Conread position: 258-433
Cow position: chr13:11570721-11570551 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 10

Conread position: 263-501
Cow position: chr13:27844136-27843911 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 145, 91

Conread position: 263-547
Cow position: chr13:47280006-47279721 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 5

Conread position: 264-508
Cow position: chr13:5619407-5619160 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 16

Conread position: 268-504
Cow position: chr13:12213758-12213994 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 44

Conread position: 278-506
Cow position: chr13:51435192-51434967 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 57

Conread position: 290-516
Cow position: chr13:4796125-4796354 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 15, 92

Conread position: 291-514
Cow position: chr13:27726256-27726467 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 49

Conread position: 298-506
Cow position: chr13:698697-698890 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 53

Conread position: 305-506
Cow position: chr13:22193726-22193923 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 55

Conread position: 311-504
Cow position: chr13:59997477-59997279 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 124, 63

Conread position: 315-506
Cow position: chr13:18597037-18596849 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 61

Conread position: 317-504
Cow position: chr13:22984781-22984970 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 117, 12

Conread position: 317-516
Cow position: chr13:57611549-57611747 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 60

Conread position: 322-506
Cow position: chr13:10854683-10854500 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 118, 53

Conread position: 324-504
Cow position: chr13:2416382-2416561 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 58

Conread position: 331-506
Cow position: chr13:48580645-48580476 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 341-506
Cow position: chr13:9103264-9103103 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 41

Conread position: 359-542
Cow position: chr13:14708733-14708924 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 39

Conread position: 397-517
Cow position: chr13:15489927-15490049 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.