Cow genome map

Conread name: rlin03_l3.y1

Conread position: 62-506
Cow position: chr14:35605329-35605779 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 63-506
Cow position: chr14:27578810-27579244 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 18

Conread position: 63-521
Cow position: chr14:47880148-47880593 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 60

Conread position: 64-452
Cow position: chr14:2298935-2299318 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 204

Conread position: 65-476
Cow position: chr14:21864053-21864445 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 291
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 121, 147

Conread position: 70-321
Cow position: chr14:3436962-3436711 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 119, 222

Conread position: 70-374
Cow position: chr14:38000495-38000199 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 92

Conread position: 70-410
Cow position: chr14:45018525-45018861 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 114, 90

Conread position: 70-506
Cow position: chr14:37983431-37983867 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 57

Conread position: 70-506
Cow position: chr14:40244145-40243706 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 99

Conread position: 70-521
Cow position: chr14:41712991-41712546 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 194

Conread position: 71-503
Cow position: chr14:44454428-44453986 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 115, 51

Conread position: 71-506
Cow position: chr14:46546013-46546443 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 292
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 121, 192

Conread position: 72-220
Cow position: chr14:25993987-25994137 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 98

Conread position: 72-364
Cow position: chr14:3588469-3588776 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 96

Conread position: 73-506
Cow position: chr14:28007584-28007150 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 57

Conread position: 75-467
Cow position: chr14:45185316-45184927 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 280
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 118, 160

Conread position: 76-473
Cow position: chr14:24783188-24783591 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 45

Conread position: 83-517
Cow position: chr14:15011504-15011950 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 221

Conread position: 84-415
Cow position: chr14:31810597-31810275 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 10

Conread position: 86-505
Cow position: chr14:44886506-44886089 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 93

Conread position: 87-506
Cow position: chr14:42693604-42693183 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 289

Conread position: 97-513
Cow position: chr14:42258895-42258485 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 114, 61

Conread position: 102-506
Cow position: chr14:24193280-24192858 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 71

Conread position: 109-488
Cow position: chr14:14835201-14835595 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 76, 158

Conread position: 123-547
Cow position: chr14:19339757-19340196 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 272

Conread position: 124-375
Cow position: chr14:30020928-30021189 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 131

Conread position: 126-506
Cow position: chr14:50650454-50650080 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 261
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 142

Conread position: 138-422
Cow position: chr14:32509777-32509489 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 20, 48

Conread position: 204-506
Cow position: chr14:19734921-19735227 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 12, 125

Conread position: 208-432
Cow position: chr14:33099275-33099052 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 52

Conread position: 208-478
Cow position: chr14:45151906-45152176 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 163

Conread position: 209-506
Cow position: chr14:34912129-34912414 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 95, 47

Conread position: 210-498
Cow position: chr14:46980179-46980468 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 135

Conread position: 210-506
Cow position: chr14:20642844-20643114 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 94, 46

Conread position: 210-506
Cow position: chr14:24739080-24738776 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 46, 108

Conread position: 210-517
Cow position: chr14:16715689-16715390 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 25

Conread position: 211-520
Cow position: chr14:27247296-27246991 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 142

Conread position: 213-472
Cow position: chr14:1314569-1314321 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 42

Conread position: 214-517
Cow position: chr14:10949686-10949979 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 91, 54

Conread position: 269-547
Cow position: chr14:50484583-50484293 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 85

Conread position: 273-506
Cow position: chr14:17556405-17556170 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 105

Conread position: 277-542
Cow position: chr14:22046605-22046352 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 19

Conread position: 278-444
Cow position: chr14:44249933-44249769 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 97

Conread position: 287-517
Cow position: chr14:17051330-17051103 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 20, 87

Conread position: 289-461
Cow position: chr14:25393849-25393675 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 95

Conread position: 320-506
Cow position: chr14:30762378-30762201 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 322-517
Cow position: chr14:25994305-25994492 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 331-506
Cow position: chr14:38722574-38722408 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 153, 46

Conread position: 333-546
Cow position: chr14:9500206-9500415 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 49

Conread position: 335-506
Cow position: chr14:32903930-32904094 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 358-516
Cow position: chr14:36420358-36420508 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 360-506
Cow position: chr14:38000079-37999940 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 89, 17

Show alignments to all cow chromosomes.