Cow genome map
Conread name: | rlin03_l3.y1 |
Conread position: | 62-506 |
Cow position: | chr14:35605329-35605779 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 66 |
Conread position: | 63-506 |
Cow position: | chr14:27578810-27579244 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 18 |
Conread position: | 63-521 |
Cow position: | chr14:47880148-47880593 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 60 |
Conread position: | 64-452 |
Cow position: | chr14:2298935-2299318 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 204 |
Conread position: | 65-476 |
Cow position: | chr14:21864053-21864445 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 291 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 121, 147 |
Conread position: | 70-321 |
Cow position: | chr14:3436962-3436711 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 175 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 119, 222 |
Conread position: | 70-374 |
Cow position: | chr14:38000495-38000199 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 92 |
Conread position: | 70-410 |
Cow position: | chr14:45018525-45018861 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 248 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 114, 90 |
Conread position: | 70-506 |
Cow position: | chr14:37983431-37983867 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 57 |
Conread position: | 70-506 |
Cow position: | chr14:40244145-40243706 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 99 |
Conread position: | 70-521 |
Cow position: | chr14:41712991-41712546 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 194 |
Conread position: | 71-503 |
Cow position: | chr14:44454428-44453986 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 312 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 115, 51 |
Conread position: | 71-506 |
Cow position: | chr14:46546013-46546443 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 292 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 121, 192 |
Conread position: | 72-220 |
Cow position: | chr14:25993987-25994137 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 112 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 115, 98 |
Conread position: | 72-364 |
Cow position: | chr14:3588469-3588776 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 218 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 120, 96 |
Conread position: | 73-506 |
Cow position: | chr14:28007584-28007150 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 57 |
Conread position: | 75-467 |
Cow position: | chr14:45185316-45184927 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 280 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 118, 160 |
Conread position: | 76-473 |
Cow position: | chr14:24783188-24783591 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 45 |
Conread position: | 83-517 |
Cow position: | chr14:15011504-15011950 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 221 |
Conread position: | 84-415 |
Cow position: | chr14:31810597-31810275 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 247 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 103, 10 |
Conread position: | 86-505 |
Cow position: | chr14:44886506-44886089 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 93 |
Conread position: | 87-506 |
Cow position: | chr14:42693604-42693183 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 289 |
Conread position: | 97-513 |
Cow position: | chr14:42258895-42258485 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 289 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 114, 61 |
Conread position: | 102-506 |
Cow position: | chr14:24193280-24192858 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 71 |
Conread position: | 109-488 |
Cow position: | chr14:14835201-14835595 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 275 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 76, 158 |
Conread position: | 123-547 |
Cow position: | chr14:19339757-19340196 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 272 |
Conread position: | 124-375 |
Cow position: | chr14:30020928-30021189 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 131 |
Conread position: | 126-506 |
Cow position: | chr14:50650454-50650080 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 261 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 61, 142 |
Conread position: | 138-422 |
Cow position: | chr14:32509777-32509489 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 199 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 20, 48 |
Conread position: | 204-506 |
Cow position: | chr14:19734921-19735227 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 220 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 12, 125 |
Conread position: | 208-432 |
Cow position: | chr14:33099275-33099052 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 154 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 20, 52 |
Conread position: | 208-478 |
Cow position: | chr14:45151906-45152176 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 189 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 28, 163 |
Conread position: | 209-506 |
Cow position: | chr14:34912129-34912414 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 217 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 95, 47 |
Conread position: | 210-498 |
Cow position: | chr14:46980179-46980468 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 135 |
Conread position: | 210-506 |
Cow position: | chr14:20642844-20643114 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 215 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 94, 46 |
Conread position: | 210-506 |
Cow position: | chr14:24739080-24738776 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 229 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 46, 108 |
Conread position: | 210-517 |
Cow position: | chr14:16715689-16715390 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 216 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 54, 25 |
Conread position: | 211-520 |
Cow position: | chr14:27247296-27246991 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 211 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 14, 142 |
Conread position: | 213-472 |
Cow position: | chr14:1314569-1314321 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 178 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 92, 42 |
Conread position: | 214-517 |
Cow position: | chr14:10949686-10949979 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 211 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 91, 54 |
Conread position: | 269-547 |
Cow position: | chr14:50484583-50484293 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 197 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 38, 85 |
Conread position: | 273-506 |
Cow position: | chr14:17556405-17556170 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 171 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 32, 105 |
Conread position: | 277-542 |
Cow position: | chr14:22046605-22046352 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 182 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 29, 19 |
Conread position: | 278-444 |
Cow position: | chr14:44249933-44249769 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 119 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 27, 97 |
Conread position: | 287-517 |
Cow position: | chr14:17051330-17051103 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 162 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 20, 87 |
Conread position: | 289-461 |
Cow position: | chr14:25393849-25393675 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 16, 95 |
Conread position: | 320-506 |
Cow position: | chr14:30762378-30762201 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 322-517 |
Cow position: | chr14:25994305-25994492 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 148 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 331-506 |
Cow position: | chr14:38722574-38722408 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 133 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 153, 46 |
Conread position: | 333-546 |
Cow position: | chr14:9500206-9500415 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 159 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 65, 49 |
Conread position: | 335-506 |
Cow position: | chr14:32903930-32904094 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 358-516 |
Cow position: | chr14:36420358-36420508 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 360-506 |
Cow position: | chr14:38000079-37999940 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 89, 17 |
Show alignments to all cow chromosomes.