Cow genome map


           Conread name:
           rlin03_l3.y1
        

               Conread position:
               63-506
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 211
               

               Conread position:
               65-507
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 169
               

               Conread position:
               70-178
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-230
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-290
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               70-410
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 322
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 165
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 319
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 54
               

               Conread position:
               70-542
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 330
               

               Conread position:
               71-326
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               118, 51
               

               Conread position:
               73-506
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 151
               

               Conread position:
               75-506
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 43
               

               Conread position:
               80-506
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               111, 118
               

               Conread position:
               83-425
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 142
               

               Conread position:
               84-506
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 23
               

               Conread position:
               84-506
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               106-303
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 132
               

               Conread position:
               108-471
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               78, 217
               

               Conread position:
               109-343
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               110-506
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 112
               

               Conread position:
               166-312
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               198-443
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               91, 21
               

               Conread position:
               203-506
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 84
               

               Conread position:
               208-433
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               208-433
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               208-472
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               208-508
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               209-509
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               210-336
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               210-485
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               49, 97
               

               Conread position:
               210-506
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               47, 169
               

               Conread position:
               210-506
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 141
               

               Conread position:
               210-542
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               212-506
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               213-516
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               59, 94
               

               Conread position:
               214-472
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               214-486
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 172
               

               Conread position:
               214-517
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               91, 43
               

               Conread position:
               217-511
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               225-433
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 126
               

               Conread position:
               225-433
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 126
               

               Conread position:
               225-499
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               252-432
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 132
               

               Conread position:
               263-483
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               278-504
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               173, 99
               

               Conread position:
               281-505
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               281-506
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 90
               

               Conread position:
               284-506
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               287-499
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               289-500
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               309-507
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               312-497
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               317-517
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               326-542
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               328-504
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               345-516
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               349-542
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 33
               
Show alignments to all cow chromosomes.