Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 58-316 |
| Cow position: | chr19:20700126-20700400 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 62-373 |
| Cow position: | chr19:426219-425911 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 6, 122 |
| Conread position: | 70-320 |
| Cow position: | chr19:36478954-36479201 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 73, 79 |
| Conread position: | 70-499 |
| Cow position: | chr19:3082143-3082562 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 70-506 |
| Cow position: | chr19:30746466-30746915 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 226 |
| Conread position: | 70-517 |
| Cow position: | chr19:19242154-19242588 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 71-375 |
| Cow position: | chr19:33285243-33284927 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 171 |
| Conread position: | 72-356 |
| Cow position: | chr19:14534588-14534318 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 75-327 |
| Cow position: | chr19:4609924-4610168 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 84-216 |
| Cow position: | chr19:4600428-4600560 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 108, 78 |
| Conread position: | 123-506 |
| Cow position: | chr19:17439974-17439601 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 67 |
| Conread position: | 123-506 |
| Cow position: | chr19:30350111-30349735 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 79 |
| Conread position: | 127-542 |
| Cow position: | chr19:25846443-25846842 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 79 |
| Conread position: | 136-517 |
| Cow position: | chr19:30051881-30051504 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 164-348 |
| Cow position: | chr19:30452382-30452194 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 132 |
| Conread position: | 202-506 |
| Cow position: | chr19:30188600-30188286 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 181 |
| Conread position: | 210-408 |
| Cow position: | chr19:43806286-43806090 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 210-486 |
| Cow position: | chr19:51070679-51070406 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 146 |
| Conread position: | 210-506 |
| Cow position: | chr19:4600710-4601002 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 213-508 |
| Cow position: | chr19:49483955-49484251 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 168 |
| Conread position: | 214-506 |
| Cow position: | chr19:28560618-28560312 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 160 |
| Conread position: | 216-517 |
| Cow position: | chr19:22670648-22670353 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 166, 35 |
| Conread position: | 258-517 |
| Cow position: | chr19:6362532-6362793 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 264-506 |
| Cow position: | chr19:30880071-30880313 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 16, 105 |
| Conread position: | 283-517 |
| Cow position: | chr19:4548380-4548147 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 283-542 |
| Cow position: | chr19:28606081-28605818 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 288-438 |
| Cow position: | chr19:33954974-33955122 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 311-506 |
| Cow position: | chr19:41504270-41504464 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 312-506 |
| Cow position: | chr19:47772326-47772515 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 318-506 |
| Cow position: | chr19:13448471-13448660 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 122, 65 |
| Conread position: | 332-508 |
| Cow position: | chr19:6478494-6478316 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 343-468 |
| Cow position: | chr19:50843607-50843729 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 34 |
| Conread position: | 360-506 |
| Cow position: | chr19:33590063-33590217 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 387-499 |
| Cow position: | chr19:30385144-30385262 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 397-506 |
| Cow position: | chr19:14534093-14533983 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.