Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 55-429 |
| Cow position: | chr21:24972489-24972115 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 170 |
| Conread position: | 67-483 |
| Cow position: | chr21:1991416-1991839 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 70-270 |
| Cow position: | chr21:24944762-24944549 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 70-360 |
| Cow position: | chr21:16166507-16166205 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 70-480 |
| Cow position: | chr21:25018998-25019405 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 55 |
| Conread position: | 70-503 |
| Cow position: | chr21:37355814-37356226 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 70-516 |
| Cow position: | chr21:23399087-23399546 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 244 |
| Conread position: | 70-516 |
| Cow position: | chr21:45447722-45448160 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 271 |
| Conread position: | 71-516 |
| Cow position: | chr21:15543817-15543370 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 37 |
| Conread position: | 72-346 |
| Cow position: | chr21:6280424-6280707 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 5, 191 |
| Conread position: | 81-375 |
| Cow position: | chr21:8273405-8273094 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 110, 9 |
| Conread position: | 109-373 |
| Cow position: | chr21:39765999-39766276 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 78, 155 |
| Conread position: | 110-504 |
| Cow position: | chr21:16678979-16679353 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 116-459 |
| Cow position: | chr21:5597332-5597669 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 70, 214 |
| Conread position: | 129-517 |
| Cow position: | chr21:26632265-26631882 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 130-472 |
| Cow position: | chr21:40442422-40442074 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 55, 251 |
| Conread position: | 134-460 |
| Cow position: | chr21:7724754-7724443 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 165-472 |
| Cow position: | chr21:37941272-37940967 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 153 |
| Conread position: | 203-437 |
| Cow position: | chr21:37341890-37341652 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 176 |
| Conread position: | 207-430 |
| Cow position: | chr21:20575496-20575275 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 208-409 |
| Cow position: | chr21:27089848-27089645 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 8, 129 |
| Conread position: | 208-477 |
| Cow position: | chr21:3614312-3614569 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 238, 49 |
| Conread position: | 209-374 |
| Cow position: | chr21:32813866-32813697 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 210-496 |
| Cow position: | chr21:39075202-39074920 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 210-506 |
| Cow position: | chr21:22941658-22941945 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 210-516 |
| Cow position: | chr21:12756196-12756514 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 116 |
| Conread position: | 210-517 |
| Cow position: | chr21:26742227-26741945 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 54, 104 |
| Conread position: | 213-499 |
| Cow position: | chr21:6667475-6667757 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 29, 168 |
| Conread position: | 242-431 |
| Cow position: | chr21:30793964-30793770 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 273-512 |
| Cow position: | chr21:26579643-26579878 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 174, 21 |
| Conread position: | 285-504 |
| Cow position: | chr21:29644009-29643783 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 292-515 |
| Cow position: | chr21:28709125-28709360 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 298-508 |
| Cow position: | chr21:5994614-5994409 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 311-499 |
| Cow position: | chr21:30567588-30567398 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 326-499 |
| Cow position: | chr21:37282915-37283087 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 343-504 |
| Cow position: | chr21:42396391-42396549 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 103, 34 |
Show alignments to all cow chromosomes.