Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 62-352 |
| Cow position: | chr22:45291561-45291866 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 69-487 |
| Cow position: | chr22:25457908-25458331 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 25 |
| Conread position: | 70-261 |
| Cow position: | chr22:24335430-24335229 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 70-321 |
| Cow position: | chr22:45496641-45496900 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 70-327 |
| Cow position: | chr22:12628432-12628172 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 197 |
| Conread position: | 70-352 |
| Cow position: | chr22:28755435-28755149 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 70-410 |
| Cow position: | chr22:14508519-14508181 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 70-438 |
| Cow position: | chr22:609869-609506 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 115, 92 |
| Conread position: | 76-516 |
| Cow position: | chr22:32018560-32018115 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 33 |
| Conread position: | 88-447 |
| Cow position: | chr22:47385893-47385513 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 98, 317 |
| Conread position: | 100-506 |
| Cow position: | chr22:4057870-4058286 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 287 |
| Conread position: | 109-506 |
| Cow position: | chr22:7281319-7281722 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 240 |
| Conread position: | 130-373 |
| Cow position: | chr22:29005477-29005217 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 57, 171 |
| Conread position: | 160-517 |
| Cow position: | chr22:44637730-44638092 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 164 |
| Conread position: | 191-444 |
| Cow position: | chr22:39904636-39904385 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 27, 126 |
| Conread position: | 191-506 |
| Cow position: | chr22:29064515-29064830 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 206-433 |
| Cow position: | chr22:14330241-14330473 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 208-430 |
| Cow position: | chr22:40853351-40853566 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 208-437 |
| Cow position: | chr22:20912363-20912135 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 209-437 |
| Cow position: | chr22:6014244-6014014 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 209-517 |
| Cow position: | chr22:45327342-45327663 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 210-476 |
| Cow position: | chr22:246515-246777 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 210-515 |
| Cow position: | chr22:8714080-8714374 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 95, 47 |
| Conread position: | 213-491 |
| Cow position: | chr22:26787526-26787240 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 218-506 |
| Cow position: | chr22:15873524-15873796 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 219-506 |
| Cow position: | chr22:12537372-12537086 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 87, 41 |
| Conread position: | 223-424 |
| Cow position: | chr22:5715081-5714880 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 237-517 |
| Cow position: | chr22:15890141-15890417 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 155 |
| Conread position: | 265-506 |
| Cow position: | chr22:13083300-13083526 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 267-506 |
| Cow position: | chr22:41321565-41321801 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 111 |
| Conread position: | 271-515 |
| Cow position: | chr22:4932154-4932403 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 279-515 |
| Cow position: | chr22:44037453-44037690 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 281-446 |
| Cow position: | chr22:34087254-34087093 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 310-465 |
| Cow position: | chr22:45787904-45787752 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 320-506 |
| Cow position: | chr22:12627964-12627780 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 328-517 |
| Cow position: | chr22:45497032-45497225 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 112, 51 |
Show alignments to all cow chromosomes.