Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 63-246 |
| Cow position: | chr23:15694424-15694607 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 63-370 |
| Cow position: | chr23:25079119-25078811 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 62 |
| Conread position: | 63-506 |
| Cow position: | chr23:16170771-16171229 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 328 |
| Conread position: | 70-506 |
| Cow position: | chr23:25408904-25409335 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 86 |
| Conread position: | 71-367 |
| Cow position: | chr23:5265440-5265142 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 16 |
| Conread position: | 84-368 |
| Cow position: | chr23:30127885-30127583 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 84-506 |
| Cow position: | chr23:9546469-9546902 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 298 |
| Conread position: | 103-369 |
| Cow position: | chr23:7253188-7253459 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 233 |
| Conread position: | 106-517 |
| Cow position: | chr23:39070115-39069695 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 214 |
| Conread position: | 112-361 |
| Cow position: | chr23:30572702-30572451 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 125-506 |
| Cow position: | chr23:36674645-36674266 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 142 |
| Conread position: | 126-516 |
| Cow position: | chr23:24401082-24400664 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 128 |
| Conread position: | 131-373 |
| Cow position: | chr23:9724893-9724655 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 164-504 |
| Cow position: | chr23:23917036-23917383 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 182 |
| Conread position: | 175-447 |
| Cow position: | chr23:6964169-6963904 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 122 |
| Conread position: | 180-431 |
| Cow position: | chr23:38026504-38026251 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 12, 103 |
| Conread position: | 207-431 |
| Cow position: | chr23:5418558-5418784 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 56, 84 |
| Conread position: | 211-437 |
| Cow position: | chr23:36217574-36217347 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 225-517 |
| Cow position: | chr23:30302181-30301882 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 258-468 |
| Cow position: | chr23:1250837-1250636 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 7, 67 |
| Conread position: | 262-506 |
| Cow position: | chr23:16479638-16479392 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 6 |
| Conread position: | 272-438 |
| Cow position: | chr23:19913807-19913646 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 40 |
| Conread position: | 272-542 |
| Cow position: | chr23:5258621-5258879 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 273-506 |
| Cow position: | chr23:15147721-15147492 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 290-503 |
| Cow position: | chr23:9654534-9654322 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 329-506 |
| Cow position: | chr23:36484088-36483918 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 341-483 |
| Cow position: | chr23:34514541-34514394 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 363-517 |
| Cow position: | chr23:15694244-15694087 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 375-517 |
| Cow position: | chr23:9425830-9425688 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 390-506 |
| Cow position: | chr23:32869397-32869279 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 22 |
Show alignments to all cow chromosomes.