Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 55-508 |
| Cow position: | chr24:38643643-38644111 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 61 |
| Conread position: | 63-359 |
| Cow position: | chr24:7038801-7039101 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 125, 47 |
| Conread position: | 63-453 |
| Cow position: | chr24:19961478-19961087 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 291 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 5, 60 |
| Conread position: | 65-216 |
| Cow position: | chr24:6665402-6665248 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 67-506 |
| Cow position: | chr24:43351055-43350613 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 254 |
| Conread position: | 70-255 |
| Cow position: | chr24:36853368-36853563 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 117, 55 |
| Conread position: | 70-323 |
| Cow position: | chr24:19627375-19627636 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 70-399 |
| Cow position: | chr24:25343107-25343439 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 117, 62 |
| Conread position: | 70-506 |
| Cow position: | chr24:6424008-6423580 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 48 |
| Conread position: | 70-506 |
| Cow position: | chr24:37386302-37385885 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 10 |
| Conread position: | 70-506 |
| Cow position: | chr24:42817305-42817753 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 128 |
| Conread position: | 70-516 |
| Cow position: | chr24:14913516-14913086 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 70-542 |
| Cow position: | chr24:17763218-17762745 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 78 |
| Conread position: | 72-506 |
| Cow position: | chr24:6177443-6177885 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 294 |
| Conread position: | 75-459 |
| Cow position: | chr24:25246087-25246473 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 48 |
| Conread position: | 83-337 |
| Cow position: | chr24:43492448-43492195 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 85-324 |
| Cow position: | chr24:12234246-12234002 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 87-502 |
| Cow position: | chr24:31301597-31301197 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 180 |
| Conread position: | 114-372 |
| Cow position: | chr24:36551267-36551004 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 157 |
| Conread position: | 115-488 |
| Cow position: | chr24:41405227-41404863 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 124-339 |
| Cow position: | chr24:25934504-25934724 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 69, 135 |
| Conread position: | 131-506 |
| Cow position: | chr24:9867370-9866988 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 134-504 |
| Cow position: | chr24:35835909-35835550 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 138-521 |
| Cow position: | chr24:32579293-32579689 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 164-432 |
| Cow position: | chr24:15474832-15475100 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 166-506 |
| Cow position: | chr24:17417219-17417576 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 21, 207 |
| Conread position: | 205-542 |
| Cow position: | chr24:30899638-30899297 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 208-453 |
| Cow position: | chr24:22839420-22839176 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 62, 179 |
| Conread position: | 208-517 |
| Cow position: | chr24:13238265-13238580 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 211-542 |
| Cow position: | chr24:31845624-31845295 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 248-506 |
| Cow position: | chr24:21714971-21714714 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 253-517 |
| Cow position: | chr24:36853592-36853843 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 59 |
| Conread position: | 281-506 |
| Cow position: | chr24:33274122-33274339 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 287-503 |
| Cow position: | chr24:36097734-36097945 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 18, 90 |
| Conread position: | 299-506 |
| Cow position: | chr24:1295979-1295779 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 152, 39 |
| Conread position: | 311-506 |
| Cow position: | chr24:19627710-19627908 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 8, 36 |
| Conread position: | 312-503 |
| Cow position: | chr24:36098886-36098701 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 97, 64 |
| Conread position: | 341-496 |
| Cow position: | chr24:620883-621037 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 105, 23 |
| Conread position: | 375-503 |
| Cow position: | chr24:25934910-25935040 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.