Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 63-288 |
| Cow position: | chr25:35038581-35038346 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 152 |
| Conread position: | 70-289 |
| Cow position: | chr25:30035617-30035830 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 70-307 |
| Cow position: | chr25:18644007-18643753 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 116, 221 |
| Conread position: | 70-452 |
| Cow position: | chr25:5567697-5567301 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 327 |
| Conread position: | 70-506 |
| Cow position: | chr25:16240531-16240118 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 70-517 |
| Cow position: | chr25:18206236-18205801 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 214 |
| Conread position: | 75-230 |
| Cow position: | chr25:10013360-10013204 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 80-282 |
| Cow position: | chr25:14279345-14279544 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 107, 40 |
| Conread position: | 106-517 |
| Cow position: | chr25:36235714-36235309 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 119 |
| Conread position: | 135-504 |
| Cow position: | chr25:33924831-33925203 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 53, 227 |
| Conread position: | 160-506 |
| Cow position: | chr25:13123366-13123723 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 230 |
| Conread position: | 167-506 |
| Cow position: | chr25:23014320-23014665 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 175-505 |
| Cow position: | chr25:13704175-13704516 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 191-542 |
| Cow position: | chr25:19686564-19686207 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 191 |
| Conread position: | 202-542 |
| Cow position: | chr25:17472866-17473203 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 209-433 |
| Cow position: | chr25:18262541-18262319 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 210-506 |
| Cow position: | chr25:16940650-16940350 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 114 |
| Conread position: | 210-518 |
| Cow position: | chr25:16193319-16193018 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 214-484 |
| Cow position: | chr25:8618193-8617933 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 266-506 |
| Cow position: | chr25:23559628-23559388 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 272-517 |
| Cow position: | chr25:20180743-20180982 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 283-506 |
| Cow position: | chr25:14279729-14279941 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 284-474 |
| Cow position: | chr25:5377356-5377167 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 285-516 |
| Cow position: | chr25:30036035-30036264 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 54 |
| Conread position: | 315-517 |
| Cow position: | chr25:33345962-33346154 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 132, 43 |
| Conread position: | 327-542 |
| Cow position: | chr25:40833106-40832887 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 343-516 |
| Cow position: | chr25:35038088-35037922 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.