Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 63-506 |
| Cow position: | chr27:9261725-9261265 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 217 |
| Conread position: | 63-516 |
| Cow position: | chr27:3934789-3935264 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 335 |
| Conread position: | 70-200 |
| Cow position: | chr27:5530638-5530506 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 70-506 |
| Cow position: | chr27:30889008-30889440 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 32 |
| Conread position: | 71-496 |
| Cow position: | chr27:26091516-26091951 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 209 |
| Conread position: | 71-517 |
| Cow position: | chr27:31238070-31238543 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 63, 342 |
| Conread position: | 106-506 |
| Cow position: | chr27:11935553-11935140 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 15 |
| Conread position: | 127-483 |
| Cow position: | chr27:13860777-13861108 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 60 |
| Conread position: | 191-545 |
| Cow position: | chr27:17564799-17564441 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 203-433 |
| Cow position: | chr27:16099947-16100181 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 129 |
| Conread position: | 207-539 |
| Cow position: | chr27:4962398-4962723 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 208-480 |
| Cow position: | chr27:9918078-9917815 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 208-498 |
| Cow position: | chr27:11755732-11756010 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 208-506 |
| Cow position: | chr27:2246743-2246452 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 173 |
| Conread position: | 214-509 |
| Cow position: | chr27:29611291-29610997 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 218-431 |
| Cow position: | chr27:26653337-26653123 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 231-433 |
| Cow position: | chr27:5261549-5261348 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 249-506 |
| Cow position: | chr27:18589446-18589191 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 263-517 |
| Cow position: | chr27:18057195-18056941 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 116 |
| Conread position: | 268-489 |
| Cow position: | chr27:4449640-4449856 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 268-504 |
| Cow position: | chr27:6534374-6534609 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 275-506 |
| Cow position: | chr27:11021435-11021215 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 298-468 |
| Cow position: | chr27:280959-281135 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 303-506 |
| Cow position: | chr27:15211413-15211204 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 94, 79 |
| Conread position: | 325-506 |
| Cow position: | chr27:7860135-7860318 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 109, 20 |
| Conread position: | 351-504 |
| Cow position: | chr27:12547762-12547917 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 7, 32 |
Show alignments to all cow chromosomes.