Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 62-257 |
| Cow position: | chr28:6277485-6277281 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 62-273 |
| Cow position: | chr28:7607300-7607515 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 63-506 |
| Cow position: | chr28:34347184-34346740 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 43 |
| Conread position: | 70-350 |
| Cow position: | chr28:22855367-22855649 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 70-425 |
| Cow position: | chr28:28630647-28631009 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 162 |
| Conread position: | 70-517 |
| Cow position: | chr28:2340611-2341068 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 30 |
| Conread position: | 71-347 |
| Cow position: | chr28:22830000-22830284 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 63 |
| Conread position: | 72-294 |
| Cow position: | chr28:15915174-15914944 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 45 |
| Conread position: | 75-364 |
| Cow position: | chr28:22360714-22361018 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 80-482 |
| Cow position: | chr28:23390416-23390827 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 58 |
| Conread position: | 80-507 |
| Cow position: | chr28:34117172-34117610 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 82 |
| Conread position: | 124-465 |
| Cow position: | chr28:16805353-16805004 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 65, 254 |
| Conread position: | 140-499 |
| Cow position: | chr28:15349604-15349961 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 171-517 |
| Cow position: | chr28:24468206-24468568 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 168 |
| Conread position: | 191-506 |
| Cow position: | chr28:26626973-26626673 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 208-437 |
| Cow position: | chr28:25315093-25315322 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 208-444 |
| Cow position: | chr28:11690305-11690071 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 208-461 |
| Cow position: | chr28:480511-480260 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 208-483 |
| Cow position: | chr28:17762563-17762838 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 208-508 |
| Cow position: | chr28:10647866-10647575 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 208-517 |
| Cow position: | chr28:32284783-32284475 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 58, 178 |
| Conread position: | 209-543 |
| Cow position: | chr28:6355290-6355623 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 210-487 |
| Cow position: | chr28:11379579-11379291 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 61, 173 |
| Conread position: | 213-435 |
| Cow position: | chr28:11783804-11783585 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 224-518 |
| Cow position: | chr28:31994422-31994117 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 245-488 |
| Cow position: | chr28:6277259-6277024 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 263-546 |
| Cow position: | chr28:17482664-17482402 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 268, 45 |
| Conread position: | 267-438 |
| Cow position: | chr28:3803135-3803307 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 273-517 |
| Cow position: | chr28:5912560-5912321 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 281-433 |
| Cow position: | chr28:8687235-8687087 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 290-508 |
| Cow position: | chr28:17598726-17598501 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 325-517 |
| Cow position: | chr28:3898377-3898571 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 59 |
| Conread position: | 332-506 |
| Cow position: | chr28:20095215-20095394 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 102, 50 |
Show alignments to all cow chromosomes.