Cow genome map
| Conread name: | rlin03_l3.y1 |
| Conread position: | 67-238 |
| Cow position: | chr29:30921625-30921444 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 70-450 |
| Cow position: | chr29:37207831-37208226 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 70-504 |
| Cow position: | chr29:18338475-18338043 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 70-506 |
| Cow position: | chr29:2481272-2480840 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 70-506 |
| Cow position: | chr29:16359688-16360125 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 320 |
| Conread position: | 70-506 |
| Cow position: | chr29:22454759-22454324 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 92 |
| Conread position: | 70-517 |
| Cow position: | chr29:8906598-8907040 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 99 |
| Conread position: | 72-383 |
| Cow position: | chr29:28115152-28115480 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 80-476 |
| Cow position: | chr29:19931408-19931815 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 104, 9 |
| Conread position: | 81-462 |
| Cow position: | chr29:13040461-13040089 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 8, 239 |
| Conread position: | 83-471 |
| Cow position: | chr29:21198570-21198171 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 313 |
| Conread position: | 86-542 |
| Cow position: | chr29:7738613-7738149 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 68 |
| Conread position: | 87-506 |
| Cow position: | chr29:35036812-35037240 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 108-407 |
| Cow position: | chr29:30813546-30813850 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 258 |
| Conread position: | 133-537 |
| Cow position: | chr29:4458723-4459136 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 167-489 |
| Cow position: | chr29:3346129-3346455 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 192-375 |
| Cow position: | chr29:9339517-9339692 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 199-433 |
| Cow position: | chr29:34848780-34849026 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 65, 189 |
| Conread position: | 203-509 |
| Cow position: | chr29:2848215-2847908 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 206-542 |
| Cow position: | chr29:8891048-8890717 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 58, 109 |
| Conread position: | 207-438 |
| Cow position: | chr29:15919771-15920003 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 209-507 |
| Cow position: | chr29:23988704-23989004 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 56, 170 |
| Conread position: | 213-508 |
| Cow position: | chr29:7959606-7959321 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 25, 6 |
| Conread position: | 272-494 |
| Cow position: | chr29:34330963-34330730 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 291-517 |
| Cow position: | chr29:12193470-12193685 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 141, 40 |
| Conread position: | 302-499 |
| Cow position: | chr29:44028102-44028295 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 144, 40 |
| Conread position: | 328-518 |
| Cow position: | chr29:7892632-7892442 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 102 |
| Conread position: | 341-506 |
| Cow position: | chr29:682187-682029 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 341-511 |
| Cow position: | chr29:5174331-5174501 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 378-517 |
| Cow position: | chr29:24442943-24442804 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 96 |
Show alignments to all cow chromosomes.