Cow genome map


           Conread name:
           rlin03_l3.y1
        

               Conread position:
               62-415
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 29
               

               Conread position:
               62-506
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 57
               

               Conread position:
               65-504
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 197
               

               Conread position:
               70-215
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-215
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-215
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               114, 64
               

               Conread position:
               70-230
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               70-247
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 39
               

               Conread position:
               70-475
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 52
               

               Conread position:
               70-516
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 204
               

               Conread position:
               70-516
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               299
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               198, 51
               

               Conread position:
               70-517
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 33
               

               Conread position:
               72-471
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               118, 87
               

               Conread position:
               72-515
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 117
               

               Conread position:
               72-518
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 114
               

               Conread position:
               75-504
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 104
               

               Conread position:
               75-506
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 184
               

               Conread position:
               76-390
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 76
               

               Conread position:
               80-373
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               184, 107
               

               Conread position:
               81-217
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               84-249
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               84-375
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               86-468
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               100, 176
               

               Conread position:
               106-547
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               107, 51
               

               Conread position:
               109-231
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               109-506
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 12
               

               Conread position:
               109-506
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 78
               

               Conread position:
               124-504
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 105
               

               Conread position:
               133-506
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               54, 168
               

               Conread position:
               141-444
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               164-360
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               179-506
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 205
               

               Conread position:
               191-506
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               28, 136
               

               Conread position:
               193-500
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 196
               

               Conread position:
               200-506
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 124
               

               Conread position:
               203-517
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               103, 49
               

               Conread position:
               205-489
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               208-506
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               209-433
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 180
               

               Conread position:
               209-434
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 79
               

               Conread position:
               211-401
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               213-517
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               214-499
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               215-438
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               219-506
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               221-506
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               226-505
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               229-442
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               26, 152
               

               Conread position:
               237-542
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               244-516
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 127
               

               Conread position:
               258-515
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               263-433
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               263-506
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 5
               

               Conread position:
               268-506
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               181, 37
               

               Conread position:
               273-517
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               286-517
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               288-506
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               289-506
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               290-517
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               299-506
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               175, 61
               

               Conread position:
               303-504
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               145, 74
               

               Conread position:
               307-506
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               315-506
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               328-506
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               328-506
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               332-506
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               108, 50
               

               Conread position:
               334-506
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               336-506
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               381-505
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               91, 0
               
Show alignments to all cow chromosomes.