Cow genome map


           Conread name:
           rlin03_l3.y1
        

               Conread position:
               57-339
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               63-331
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               63-506
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               70-179
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-241
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               139, 96
               

               Conread position:
               70-252
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               116, 172
               

               Conread position:
               70-352
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 169
               

               Conread position:
               70-367
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 142
               

               Conread position:
               70-372
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               117, 84
               

               Conread position:
               70-499
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 234
               

               Conread position:
               70-504
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 52
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 119
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 103
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 184
               

               Conread position:
               70-534
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 52
               

               Conread position:
               71-369
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 11
               

               Conread position:
               71-506
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 198
               

               Conread position:
               72-364
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               119, 56
               

               Conread position:
               82-453
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 199
               

               Conread position:
               82-500
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               306
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               104, 23
               

               Conread position:
               94-355
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               11, 133
               

               Conread position:
               97-322
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               106-476
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 133
               

               Conread position:
               108-324
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 150
               

               Conread position:
               108-502
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 240
               

               Conread position:
               109-452
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               75, 47
               

               Conread position:
               110-506
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 134
               

               Conread position:
               164-299
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 64
               

               Conread position:
               164-506
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 107
               

               Conread position:
               190-441
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               204-425
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               208-403
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               208-488
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               208-505
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               48, 127
               

               Conread position:
               208-506
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               208-506
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 170
               

               Conread position:
               209-470
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               210-489
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               210-517
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               211-506
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 95
               

               Conread position:
               213-508
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               230-542
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               31, 104
               

               Conread position:
               237-433
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               240-504
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 144
               

               Conread position:
               251-505
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               131, 111
               

               Conread position:
               252-508
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 126
               

               Conread position:
               257-433
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               258-502
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               261-516
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               267-496
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               269-488
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               278-506
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               104, 16
               

               Conread position:
               288-518
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               17, 147
               

               Conread position:
               291-506
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               291-506
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               306-506
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               311-506
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               138, 71
               

               Conread position:
               312-542
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               195, 65
               

               Conread position:
               315-506
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 68
               

               Conread position:
               321-502
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               321-506
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               331-517
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               333-516
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               110, 49
               

               Conread position:
               337-475
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 40
               
Show alignments to all cow chromosomes.