Cow genome map


           Conread name:
           rlin03_l3.y1
        

               Conread position:
               62-309
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               62-516
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               67-504
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               67-506
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               68, 321
               

               Conread position:
               70-337
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               117, 52
               

               Conread position:
               70-503
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 348
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 82
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 327
               

               Conread position:
               70-517
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 52
               

               Conread position:
               71-235
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               116, 50
               

               Conread position:
               72-517
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 79
               

               Conread position:
               73-212
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               73-506
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 317
               

               Conread position:
               75-375
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               111, 188
               

               Conread position:
               83-495
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 307
               

               Conread position:
               84-541
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               324
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               85-331
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               101, 147
               

               Conread position:
               86-344
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 26
               

               Conread position:
               96-322
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               106-506
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 89
               

               Conread position:
               124-266
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 142
               

               Conread position:
               124-339
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 139
               

               Conread position:
               124-419
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               133-467
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               134-506
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               284
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               138-387
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 164
               

               Conread position:
               145-307
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               148-348
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               148-514
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               35, 81
               

               Conread position:
               156-416
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               31, 202
               

               Conread position:
               195-506
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 34
               

               Conread position:
               201-453
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               12, 168
               

               Conread position:
               201-506
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               201-515
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               207-433
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               207-438
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               208-433
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               10, 170
               

               Conread position:
               208-471
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               208-478
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 111
               

               Conread position:
               208-488
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               208-517
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               210-401
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 169
               

               Conread position:
               210-468
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               95, 43
               

               Conread position:
               210-506
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               97, 47
               

               Conread position:
               211-348
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               213-437
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               53, 102
               

               Conread position:
               213-517
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 149
               

               Conread position:
               218-507
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               219-517
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               222-429
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               43, 158
               

               Conread position:
               227-504
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               260-506
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               152, 41
               

               Conread position:
               260-516
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 6
               

               Conread position:
               263-506
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               265-506
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               172, 50
               

               Conread position:
               268-433
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               268-506
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               166, 29
               

               Conread position:
               273-445
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               276-542
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               286-502
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               312-517
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               130, 65
               

               Conread position:
               316-508
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               317-504
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               118, 60
               

               Conread position:
               319-517
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               322-506
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               328-506
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               122, 54
               

               Conread position:
               328-517
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               331-506
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               336-497
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               343-506
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 34
               
Show alignments to all cow chromosomes.