Cow genome map

Conread name: rlin03_l3.y1

Conread position: 62-506
Cow position: chr7:11593105-11592682 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 54

Conread position: 62-517
Cow position: chr7:39512496-39512057 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 63-506
Cow position: chr7:62516111-62516556 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 47

Conread position: 70-216
Cow position: chr7:37024939-37025086 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 70-343
Cow position: chr7:63547910-63547629 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 40

Conread position: 70-447
Cow position: chr7:27709553-27709163 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 25

Conread position: 70-487
Cow position: chr7:13822892-13823318 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 48

Conread position: 70-502
Cow position: chr7:20289154-20288715 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 20

Conread position: 70-504
Cow position: chr7:63328187-63328636 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 92

Conread position: 70-506
Cow position: chr7:42222326-42221877 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 324

Conread position: 70-506
Cow position: chr7:48335361-48334953 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 156

Conread position: 70-506
Cow position: chr7:61425661-61426119 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 330

Conread position: 71-210
Cow position: chr7:35754571-35754713 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 71-216
Cow position: chr7:28671909-28671765 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 58

Conread position: 72-209
Cow position: chr7:23446814-23446674 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 72-216
Cow position: chr7:11187331-11187477 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 52

Conread position: 72-307
Cow position: chr7:2967242-2967490 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 114, 46

Conread position: 72-506
Cow position: chr7:43004494-43004932 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 316
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 114, 149

Conread position: 75-217
Cow position: chr7:52130623-52130769 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 80-339
Cow position: chr7:1398163-1397900 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 24, 30

Conread position: 80-518
Cow position: chr7:20104900-20104452 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 19

Conread position: 84-516
Cow position: chr7:29378029-29377602 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 232

Conread position: 85-488
Cow position: chr7:65953278-65952868 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 153

Conread position: 92-339
Cow position: chr7:27763107-27763353 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 91, 133

Conread position: 115-364
Cow position: chr7:64366711-64366961 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 150

Conread position: 124-303
Cow position: chr7:34798414-34798597 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 67

Conread position: 124-320
Cow position: chr7:68367388-68367177 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 186

Conread position: 128-506
Cow position: chr7:67498863-67499241 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 134

Conread position: 129-505
Cow position: chr7:56664234-56664601 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 83

Conread position: 130-542
Cow position: chr7:5701086-5701509 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 253

Conread position: 146-506
Cow position: chr7:45064238-45063873 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 194

Conread position: 165-504
Cow position: chr7:28560851-28560492 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 221
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 159

Conread position: 200-517
Cow position: chr7:52131361-52131683 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 181

Conread position: 207-432
Cow position: chr7:49893427-49893205 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 31

Conread position: 207-444
Cow position: chr7:5435638-5435398 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 54, 49

Conread position: 207-451
Cow position: chr7:5448056-5447807 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 49

Conread position: 207-517
Cow position: chr7:59844704-59845009 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 61

Conread position: 208-360
Cow position: chr7:11187791-11187947 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 118

Conread position: 208-433
Cow position: chr7:53405945-53406171 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 15

Conread position: 208-438
Cow position: chr7:33062518-33062292 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 34

Conread position: 208-516
Cow position: chr7:45099477-45099779 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 63, 98

Conread position: 208-517
Cow position: chr7:64198628-64198326 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 34

Conread position: 209-487
Cow position: chr7:5247687-5247402 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 8

Conread position: 210-381
Cow position: chr7:12163409-12163580 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 118

Conread position: 210-452
Cow position: chr7:59164150-59164393 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 59

Conread position: 210-504
Cow position: chr7:62048666-62048954 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 40

Conread position: 210-515
Cow position: chr7:33339385-33339675 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 129

Conread position: 212-509
Cow position: chr7:68246563-68246862 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 177

Conread position: 263-512
Cow position: chr7:43231055-43231296 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 5

Conread position: 268-442
Cow position: chr7:19465530-19465359 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 108

Conread position: 275-472
Cow position: chr7:31442036-31441835 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 30, 103

Conread position: 275-506
Cow position: chr7:46216365-46216593 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 50

Conread position: 313-542
Cow position: chr7:59204625-59204868 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 64

Conread position: 315-506
Cow position: chr7:68366894-68366697 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 55, 155

Conread position: 328-527
Cow position: chr7:40622552-40622752 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 51

Conread position: 399-506
Cow position: chr7:43257631-43257738 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 13

Show alignments to all cow chromosomes.