Cow genome map


           Conread name:
           rlin03_l3.y1
        

               Conread position:
               62-506
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               62-517
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               63-506
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 47
               

               Conread position:
               70-216
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               70-343
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               70-447
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               70-487
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               70-502
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               70-504
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 92
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 324
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 156
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 330
               

               Conread position:
               71-210
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               71-216
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 58
               

               Conread position:
               72-209
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               72-216
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               115, 52
               

               Conread position:
               72-307
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               114, 46
               

               Conread position:
               72-506
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               114, 149
               

               Conread position:
               75-217
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               80-339
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               80-518
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               84-516
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 232
               

               Conread position:
               85-488
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 153
               

               Conread position:
               92-339
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               91, 133
               

               Conread position:
               115-364
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 150
               

               Conread position:
               124-303
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               124-320
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 186
               

               Conread position:
               128-506
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 134
               

               Conread position:
               129-505
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               130-542
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 253
               

               Conread position:
               146-506
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               255
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               49, 194
               

               Conread position:
               165-504
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 159
               

               Conread position:
               200-517
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               13, 181
               

               Conread position:
               207-432
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               207-444
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               54, 49
               

               Conread position:
               207-451
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 49
               

               Conread position:
               207-517
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               12, 61
               

               Conread position:
               208-360
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 118
               

               Conread position:
               208-433
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 15
               

               Conread position:
               208-438
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               208-516
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               63, 98
               

               Conread position:
               208-517
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               209-487
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               61, 8
               

               Conread position:
               210-381
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 118
               

               Conread position:
               210-452
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               210-504
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 40
               

               Conread position:
               210-515
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 129
               

               Conread position:
               212-509
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 177
               

               Conread position:
               263-512
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               268-442
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 108
               

               Conread position:
               275-472
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               30, 103
               

               Conread position:
               275-506
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               313-542
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 64
               

               Conread position:
               315-506
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               328-527
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               399-506
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 13
               
Show alignments to all cow chromosomes.