Cow genome map
Conread name: | rlin03_l3.y1 |
Conread position: | 62-506 |
Cow position: | chr7:11593105-11592682 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 54 |
Conread position: | 62-517 |
Cow position: | chr7:39512496-39512057 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 60 |
Conread position: | 63-506 |
Cow position: | chr7:62516111-62516556 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 47 |
Conread position: | 70-216 |
Cow position: | chr7:37024939-37025086 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 70-343 |
Cow position: | chr7:63547910-63547629 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 203 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 34, 40 |
Conread position: | 70-447 |
Cow position: | chr7:27709553-27709163 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 283 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 11, 25 |
Conread position: | 70-487 |
Cow position: | chr7:13822892-13823318 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 48 |
Conread position: | 70-502 |
Cow position: | chr7:20289154-20288715 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 20 |
Conread position: | 70-504 |
Cow position: | chr7:63328187-63328636 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 92 |
Conread position: | 70-506 |
Cow position: | chr7:42222326-42221877 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 324 |
Conread position: | 70-506 |
Cow position: | chr7:48335361-48334953 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 156 |
Conread position: | 70-506 |
Cow position: | chr7:61425661-61426119 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 330 |
Conread position: | 71-210 |
Cow position: | chr7:35754571-35754713 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 71-216 |
Cow position: | chr7:28671909-28671765 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 76, 58 |
Conread position: | 72-209 |
Cow position: | chr7:23446814-23446674 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 105 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 72-216 |
Cow position: | chr7:11187331-11187477 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 115, 52 |
Conread position: | 72-307 |
Cow position: | chr7:2967242-2967490 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 186 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 114, 46 |
Conread position: | 72-506 |
Cow position: | chr7:43004494-43004932 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 316 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 114, 149 |
Conread position: | 75-217 |
Cow position: | chr7:52130623-52130769 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 80-339 |
Cow position: | chr7:1398163-1397900 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 204 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 24, 30 |
Conread position: | 80-518 |
Cow position: | chr7:20104900-20104452 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 19 |
Conread position: | 84-516 |
Cow position: | chr7:29378029-29377602 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 232 |
Conread position: | 85-488 |
Cow position: | chr7:65953278-65952868 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 153 |
Conread position: | 92-339 |
Cow position: | chr7:27763107-27763353 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 173 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 91, 133 |
Conread position: | 115-364 |
Cow position: | chr7:64366711-64366961 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 150 |
Conread position: | 124-303 |
Cow position: | chr7:34798414-34798597 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 143 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 58, 67 |
Conread position: | 124-320 |
Cow position: | chr7:68367388-68367177 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 156 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 45, 186 |
Conread position: | 128-506 |
Cow position: | chr7:67498863-67499241 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 266 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 58, 134 |
Conread position: | 129-505 |
Cow position: | chr7:56664234-56664601 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 83 |
Conread position: | 130-542 |
Cow position: | chr7:5701086-5701509 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 253 |
Conread position: | 146-506 |
Cow position: | chr7:45064238-45063873 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 255 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 49, 194 |
Conread position: | 165-504 |
Cow position: | chr7:28560851-28560492 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 221 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 22, 159 |
Conread position: | 200-517 |
Cow position: | chr7:52131361-52131683 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 229 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 13, 181 |
Conread position: | 207-432 |
Cow position: | chr7:49893427-49893205 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 157 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 99, 31 |
Conread position: | 207-444 |
Cow position: | chr7:5435638-5435398 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 168 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 54, 49 |
Conread position: | 207-451 |
Cow position: | chr7:5448056-5447807 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 174 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 54, 49 |
Conread position: | 207-517 |
Cow position: | chr7:59844704-59845009 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 224 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 12, 61 |
Conread position: | 208-360 |
Cow position: | chr7:11187791-11187947 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 52, 118 |
Conread position: | 208-433 |
Cow position: | chr7:53405945-53406171 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 159 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 59, 15 |
Conread position: | 208-438 |
Cow position: | chr7:33062518-33062292 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 165 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 51, 34 |
Conread position: | 208-516 |
Cow position: | chr7:45099477-45099779 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 226 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 63, 98 |
Conread position: | 208-517 |
Cow position: | chr7:64198628-64198326 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 218 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 7, 34 |
Conread position: | 209-487 |
Cow position: | chr7:5247687-5247402 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 193 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 61, 8 |
Conread position: | 210-381 |
Cow position: | chr7:12163409-12163580 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 63, 118 |
Conread position: | 210-452 |
Cow position: | chr7:59164150-59164393 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 177 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 51, 59 |
Conread position: | 210-504 |
Cow position: | chr7:62048666-62048954 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 40 |
Conread position: | 210-515 |
Cow position: | chr7:33339385-33339675 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 221 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 13, 129 |
Conread position: | 212-509 |
Cow position: | chr7:68246563-68246862 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 205 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 53, 177 |
Conread position: | 263-512 |
Cow position: | chr7:43231055-43231296 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 42, 5 |
Conread position: | 268-442 |
Cow position: | chr7:19465530-19465359 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 37, 108 |
Conread position: | 275-472 |
Cow position: | chr7:31442036-31441835 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 157 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 30, 103 |
Conread position: | 275-506 |
Cow position: | chr7:46216365-46216593 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 179 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 30, 50 |
Conread position: | 313-542 |
Cow position: | chr7:59204625-59204868 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 171 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 122, 64 |
Conread position: | 315-506 |
Cow position: | chr7:68366894-68366697 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 148 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 55, 155 |
Conread position: | 328-527 |
Cow position: | chr7:40622552-40622752 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 119, 51 |
Conread position: | 399-506 |
Cow position: | chr7:43257631-43257738 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 91 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 41, 13 |
Show alignments to all cow chromosomes.