Cow genome map


           Conread name:
           rlin03_l3.y1
        

               Conread position:
               62-503
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 87
               

               Conread position:
               67-491
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               70-252
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               141, 119
               

               Conread position:
               70-325
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               70-467
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 316
               

               Conread position:
               70-473
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 35
               

               Conread position:
               70-493
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 40
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 244
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 251
               

               Conread position:
               70-506
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 16
               

               Conread position:
               70-542
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 67
               

               Conread position:
               72-208
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               73-359
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 203
               

               Conread position:
               73-506
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               74-504
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 90
               

               Conread position:
               75-506
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 32
               

               Conread position:
               77-485
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               80-351
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 43
               

               Conread position:
               80-506
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 43
               

               Conread position:
               80-517
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 306
               

               Conread position:
               85-484
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 308
               

               Conread position:
               86-506
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               93-506
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               106-361
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               118-339
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               129-499
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               64, 195
               

               Conread position:
               129-506
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 45
               

               Conread position:
               130-517
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               132-369
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 142
               

               Conread position:
               132-417
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               56, 253
               

               Conread position:
               135-517
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 54
               

               Conread position:
               155-493
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               163-517
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               177-517
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 217
               

               Conread position:
               199-506
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               200-506
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 180
               

               Conread position:
               203-373
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               204-488
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               205-517
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 183
               

               Conread position:
               206-420
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-452
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 160
               

               Conread position:
               208-486
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               208-506
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               53, 29
               

               Conread position:
               208-547
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               209-364
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               209-436
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 178
               

               Conread position:
               209-516
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               210-506
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               210-508
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 114
               

               Conread position:
               210-508
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               60, 213
               

               Conread position:
               213-437
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 103
               

               Conread position:
               213-517
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               253-489
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               255-506
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               257-506
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               260-516
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               261-433
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               263-461
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               268-506
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               169, 38
               

               Conread position:
               269-404
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               269-506
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               270-517
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               271-517
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 107
               

               Conread position:
               301-506
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               126, 76
               

               Conread position:
               320-455
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               110, 56
               

               Conread position:
               336-517
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               381-517
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               395-504
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 0
               
Show alignments to all cow chromosomes.