Cow genome map
| Conread name: | rlnt13c_p11.y1 |
| Conread position: | 1-300 |
| Cow position: | chr11:42793250-42792930 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 8-403 |
| Cow position: | chr11:77319158-77319563 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 166, 79 |
| Conread position: | 18-397 |
| Cow position: | chr11:24601715-24602105 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 207 |
| Conread position: | 33-279 |
| Cow position: | chr11:16251489-16251223 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 33-287 |
| Cow position: | chr11:30912233-30911973 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 66, 137 |
| Conread position: | 33-306 |
| Cow position: | chr11:69119059-69119342 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 72, 168 |
| Conread position: | 33-308 |
| Cow position: | chr11:44637001-44636703 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 33-339 |
| Cow position: | chr11:62151122-62150814 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 33-346 |
| Cow position: | chr11:35684738-35684414 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 72, 238 |
| Conread position: | 33-360 |
| Cow position: | chr11:47899036-47899368 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 185 |
| Conread position: | 33-363 |
| Cow position: | chr11:15632800-15632457 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 277 |
| Conread position: | 33-395 |
| Cow position: | chr11:1625455-1625079 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 167, 131 |
| Conread position: | 33-396 |
| Cow position: | chr11:30354826-30355188 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 43, 118 |
| Conread position: | 33-412 |
| Cow position: | chr11:45646834-45646433 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 256 |
| Conread position: | 34-308 |
| Cow position: | chr11:53553012-53553269 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 178, 46 |
| Conread position: | 34-366 |
| Cow position: | chr11:13061463-13061127 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 179, 54 |
| Conread position: | 47-397 |
| Cow position: | chr11:64044012-64044362 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 270 |
| Conread position: | 103-306 |
| Cow position: | chr11:80556053-80556268 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 71, 199 |
Show alignments to all cow chromosomes.