Cow genome map


           Conread name:
           rlnt13c_p11.y1
        

               Conread position:
               12-408
               

               Cow position:
               chr9:34287066-34286655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               285
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               150, 58
               

               Conread position:
               17-305
               

               Cow position:
               chr9:7634532-7634235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               147, 12
               

               Conread position:
               33-306
               

               Cow position:
               chr9:57896874-57897147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               140, 64
               

               Conread position:
               33-308
               

               Cow position:
               chr9:34374678-34374963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               33-368
               

               Cow position:
               chr9:51204976-51204628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 298
               

               Conread position:
               36-306
               

               Cow position:
               chr9:55256301-55256589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               39-397
               

               Cow position:
               chr9:34957806-34958184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               263
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               53, 299
               

               Conread position:
               56-368
               

               Cow position:
               chr9:48628260-48627928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 116
               

               Conread position:
               74-307
               

               Cow position:
               chr9:62907836-62908057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               81-395
               

               Cow position:
               chr9:41728456-41728130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 23
               

               Conread position:
               93-406
               

               Cow position:
               chr9:4340981-4341297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               71, 118
               

               Conread position:
               100-308
               

               Cow position:
               chr9:49292967-49293182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 14
               
Show alignments to all cow chromosomes.