Cow genome map
| Conread name: | rnca04b_c8.y1 |
| Conread position: | 3-373 |
| Cow position: | chr11:7686846-7687226 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 3-428 |
| Cow position: | chr11:7306589-7306155 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 3-452 |
| Cow position: | chr11:44507136-44507585 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 9-182 |
| Cow position: | chr11:1601844-1602013 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 9-290 |
| Cow position: | chr11:32682628-32682907 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 9-335 |
| Cow position: | chr11:81853638-81853320 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 171 |
| Conread position: | 9-454 |
| Cow position: | chr11:3237514-3237959 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 217, 15 |
| Conread position: | 9-454 |
| Cow position: | chr11:65162573-65162120 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 27 |
| Conread position: | 11-335 |
| Cow position: | chr11:72017178-72017494 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 172 |
| Conread position: | 16-182 |
| Cow position: | chr11:11124428-11124593 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 19-454 |
| Cow position: | chr11:25180065-25180494 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 276, 114 |
| Conread position: | 22-453 |
| Cow position: | chr11:42428311-42428749 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 40 |
| Conread position: | 89-452 |
| Cow position: | chr11:25526635-25526989 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 95-455 |
| Cow position: | chr11:87126894-87127259 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 211, 32 |
| Conread position: | 100-453 |
| Cow position: | chr11:72005093-72005454 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 195, 13 |
| Conread position: | 106-455 |
| Cow position: | chr11:24677115-24677472 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 46 |
| Conread position: | 110-309 |
| Cow position: | chr11:52462124-52462323 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 77 |
| Conread position: | 110-455 |
| Cow position: | chr11:8888087-8887735 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 150, 71 |
| Conread position: | 110-455 |
| Cow position: | chr11:9660319-9659979 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 185, 71 |
| Conread position: | 111-448 |
| Cow position: | chr11:21466163-21466491 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 184, 70 |
| Conread position: | 114-373 |
| Cow position: | chr11:9220958-9220702 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 181, 65 |
| Conread position: | 114-448 |
| Cow position: | chr11:49076595-49076254 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 184, 70 |
| Conread position: | 119-359 |
| Cow position: | chr11:56178984-56179219 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 166, 68 |
| Conread position: | 144-335 |
| Cow position: | chr11:75919645-75919838 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 151, 37 |
| Conread position: | 144-336 |
| Cow position: | chr11:7394214-7394398 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 156, 40 |
| Conread position: | 144-384 |
| Cow position: | chr11:12352198-12351950 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 151, 37 |
Show alignments to all cow chromosomes.