Cow genome map
| Conread name: | rnca04b_c8.y1 |
| Conread position: | 2-363 |
| Cow position: | chr15:10479799-10479446 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 114 |
| Conread position: | 3-388 |
| Cow position: | chr15:15266900-15266527 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 59 |
| Conread position: | 5-223 |
| Cow position: | chr15:27065154-27064940 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 8-455 |
| Cow position: | chr15:40104353-40104809 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 112 |
| Conread position: | 9-335 |
| Cow position: | chr15:12613973-12614282 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 9-363 |
| Cow position: | chr15:21816847-21816500 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 9-368 |
| Cow position: | chr15:45885719-45886062 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 9-373 |
| Cow position: | chr15:36627712-36627348 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 9-455 |
| Cow position: | chr15:1236323-1236759 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 173 |
| Conread position: | 11-175 |
| Cow position: | chr15:684612-684776 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-368 |
| Cow position: | chr15:4631024-4630664 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 47 |
| Conread position: | 11-407 |
| Cow position: | chr15:323824-324219 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 103 |
| Conread position: | 13-455 |
| Cow position: | chr15:11299792-11299351 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 309 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 192, 104 |
| Conread position: | 14-455 |
| Cow position: | chr15:21447977-21448433 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 26 |
| Conread position: | 20-283 |
| Cow position: | chr15:12364309-12364566 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 230, 62 |
| Conread position: | 20-384 |
| Cow position: | chr15:38958116-38957759 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 110 |
| Conread position: | 26-224 |
| Cow position: | chr15:51799396-51799593 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 31-224 |
| Cow position: | chr15:17683785-17683593 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 33-423 |
| Cow position: | chr15:32605898-32605504 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 262, 106 |
| Conread position: | 45-290 |
| Cow position: | chr15:8407487-8407744 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 191, 140 |
| Conread position: | 80-343 |
| Cow position: | chr15:1763048-1763314 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 82-455 |
| Cow position: | chr15:6077730-6078092 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 246, 7 |
| Conread position: | 92-373 |
| Cow position: | chr15:52635139-52635422 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 242, 81 |
| Conread position: | 104-335 |
| Cow position: | chr15:8098466-8098698 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 113, 74 |
| Conread position: | 105-332 |
| Cow position: | chr15:32680571-32680345 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 6, 78 |
| Conread position: | 105-374 |
| Cow position: | chr15:6387309-6387037 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 110-343 |
| Cow position: | chr15:25790468-25790233 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 64, 78 |
| Conread position: | 110-451 |
| Cow position: | chr15:10788082-10787735 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 185, 71 |
| Conread position: | 110-453 |
| Cow position: | chr15:6651023-6650690 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 110-455 |
| Cow position: | chr15:6278245-6277897 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 185, 71 |
| Conread position: | 110-455 |
| Cow position: | chr15:6371833-6371481 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 110-455 |
| Cow position: | chr15:21960531-21960871 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 219, 71 |
| Conread position: | 110-455 |
| Cow position: | chr15:25135445-25135116 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 110-455 |
| Cow position: | chr15:35681650-35681298 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 151, 69 |
| Conread position: | 110-455 |
| Cow position: | chr15:36647936-36648272 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 239, 71 |
| Conread position: | 111-434 |
| Cow position: | chr15:491171-490844 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 147, 71 |
| Conread position: | 114-455 |
| Cow position: | chr15:4794695-4795040 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 151, 67 |
| Conread position: | 119-455 |
| Cow position: | chr15:35649196-35648856 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 183, 55 |
| Conread position: | 127-363 |
| Cow position: | chr15:2923522-2923761 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 166, 51 |
| Conread position: | 144-452 |
| Cow position: | chr15:6184153-6184458 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 35 |
| Conread position: | 144-453 |
| Cow position: | chr15:7895141-7894843 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 201, 37 |
| Conread position: | 152-355 |
| Cow position: | chr15:685200-685400 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 30 |
Show alignments to all cow chromosomes.