Cow genome map
| Conread name: | rnca04b_c8.y1 |
| Conread position: | 5-368 |
| Cow position: | chr16:49955962-49955615 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 95 |
| Conread position: | 9-152 |
| Cow position: | chr16:31717408-31717265 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-348 |
| Cow position: | chr16:44964609-44964928 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 9-369 |
| Cow position: | chr16:29981823-29982179 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 25 |
| Conread position: | 9-452 |
| Cow position: | chr16:44388980-44388546 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 287 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 176, 84 |
| Conread position: | 10-332 |
| Cow position: | chr16:5888015-5888332 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 11-453 |
| Cow position: | chr16:14422287-14422726 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 55 |
| Conread position: | 12-246 |
| Cow position: | chr16:45568420-45568651 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 13-454 |
| Cow position: | chr16:16029331-16029776 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 80, 61 |
| Conread position: | 14-454 |
| Cow position: | chr16:36233044-36232587 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 36 |
| Conread position: | 20-348 |
| Cow position: | chr16:44673560-44673886 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 20-454 |
| Cow position: | chr16:334560-334986 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 28 |
| Conread position: | 42-338 |
| Cow position: | chr16:13650814-13650529 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 44-335 |
| Cow position: | chr16:52816493-52816185 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 95-455 |
| Cow position: | chr16:7905300-7905655 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 97-335 |
| Cow position: | chr16:49236476-49236241 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 195, 17 |
| Conread position: | 106-378 |
| Cow position: | chr16:49257952-49257678 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 110-454 |
| Cow position: | chr16:36282074-36282407 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 110-455 |
| Cow position: | chr16:19714184-19713836 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 190, 84 |
| Conread position: | 110-455 |
| Cow position: | chr16:20255647-20255295 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 185, 71 |
| Conread position: | 111-450 |
| Cow position: | chr16:11051848-11052180 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 223, 33 |
| Conread position: | 111-454 |
| Cow position: | chr16:29676644-29676294 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 176, 70 |
| Conread position: | 111-454 |
| Cow position: | chr16:39818287-39818635 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 184, 74 |
| Conread position: | 114-373 |
| Cow position: | chr16:29031573-29031828 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 181, 70 |
| Conread position: | 117-268 |
| Cow position: | chr16:25152496-25152642 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 123-415 |
| Cow position: | chr16:51083234-51083524 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 166, 65 |
| Conread position: | 126-363 |
| Cow position: | chr16:16687537-16687766 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 127, 58 |
| Conread position: | 141-335 |
| Cow position: | chr16:12302775-12302580 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 144-447 |
| Cow position: | chr16:54647030-54647336 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 135, 40 |
Show alignments to all cow chromosomes.