Cow genome map
| Conread name: | rnca04b_c8.y1 |
| Conread position: | 3-212 |
| Cow position: | chr21:28839082-28838874 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 9-167 |
| Cow position: | chr21:28874015-28874171 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 9-291 |
| Cow position: | chr21:36713840-36714107 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 9-303 |
| Cow position: | chr21:18820685-18820397 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 28 |
| Conread position: | 9-373 |
| Cow position: | chr21:35089112-35089476 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 29 |
| Conread position: | 9-454 |
| Cow position: | chr21:358438-358892 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 307 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 226, 105 |
| Conread position: | 16-295 |
| Cow position: | chr21:26617197-26616935 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 118 |
| Conread position: | 25-293 |
| Cow position: | chr21:46908655-46908390 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 57-446 |
| Cow position: | chr21:20745266-20744870 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 122 |
| Conread position: | 77-346 |
| Cow position: | chr21:11053084-11052830 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 254, 105 |
| Conread position: | 81-453 |
| Cow position: | chr21:4223180-4222822 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 270, 100 |
| Conread position: | 82-453 |
| Cow position: | chr21:4076359-4076721 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 235, 29 |
| Conread position: | 90-293 |
| Cow position: | chr21:25286109-25286306 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 92-455 |
| Cow position: | chr21:35595887-35596257 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 95-455 |
| Cow position: | chr21:2717157-2716793 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 200, 84 |
| Conread position: | 108-335 |
| Cow position: | chr21:4590455-4590227 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 187, 5 |
| Conread position: | 110-347 |
| Cow position: | chr21:2542363-2542126 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 185, 68 |
| Conread position: | 110-453 |
| Cow position: | chr21:2530595-2530252 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 223, 62 |
| Conread position: | 110-455 |
| Cow position: | chr21:4455609-4455932 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 290, 71 |
| Conread position: | 110-455 |
| Cow position: | chr21:13124455-13124124 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 68 |
| Conread position: | 110-455 |
| Cow position: | chr21:29086024-29086368 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 185, 69 |
| Conread position: | 111-298 |
| Cow position: | chr21:23809285-23809471 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 142, 76 |
| Conread position: | 111-455 |
| Cow position: | chr21:34259686-34259336 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 178, 70 |
| Conread position: | 144-455 |
| Cow position: | chr21:3614872-3615170 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 159-349 |
| Cow position: | chr21:2521336-2521522 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 172, 25 |
Show alignments to all cow chromosomes.