Cow genome map
| Conread name: | rnca04b_c8.y1 |
| Conread position: | 3-314 |
| Cow position: | chr7:49445595-49445904 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 4-297 |
| Cow position: | chr7:63961405-63961118 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 8-195 |
| Cow position: | chr7:25249874-25250060 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 8-422 |
| Cow position: | chr7:54868129-54867731 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 330, 15 |
| Conread position: | 9-169 |
| Cow position: | chr7:1737254-1737088 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 9-448 |
| Cow position: | chr7:31864184-31864612 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 279, 37 |
| Conread position: | 9-450 |
| Cow position: | chr7:26883443-26883900 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 187 |
| Conread position: | 9-452 |
| Cow position: | chr7:47049735-47050183 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 79 |
| Conread position: | 11-293 |
| Cow position: | chr7:22680699-22680422 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 12-373 |
| Cow position: | chr7:60858041-60857688 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 24 |
| Conread position: | 16-204 |
| Cow position: | chr7:54886824-54887009 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 17-335 |
| Cow position: | chr7:23447805-23447514 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 20-335 |
| Cow position: | chr7:20429685-20429385 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 23-363 |
| Cow position: | chr7:37020980-37021308 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 307, 70 |
| Conread position: | 38-355 |
| Cow position: | chr7:39556891-39556577 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 255, 94 |
| Conread position: | 38-447 |
| Cow position: | chr7:58991432-58991849 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 74, 239 |
| Conread position: | 42-327 |
| Cow position: | chr7:26457793-26457508 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 43-287 |
| Cow position: | chr7:68556261-68556500 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 58-373 |
| Cow position: | chr7:64394875-64395166 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 277, 81 |
| Conread position: | 78-455 |
| Cow position: | chr7:55281421-55281027 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 178 |
| Conread position: | 83-450 |
| Cow position: | chr7:67416447-67416800 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 86-452 |
| Cow position: | chr7:52120696-52120320 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 97-378 |
| Cow position: | chr7:20107151-20106872 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 124, 87 |
| Conread position: | 99-382 |
| Cow position: | chr7:18936167-18935886 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 99-455 |
| Cow position: | chr7:38535945-38536282 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 100-298 |
| Cow position: | chr7:21251826-21251631 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 100-396 |
| Cow position: | chr7:67425771-67426070 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 81 |
| Conread position: | 106-369 |
| Cow position: | chr7:48632800-48633064 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 106-408 |
| Cow position: | chr7:51013368-51013670 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 109-452 |
| Cow position: | chr7:41489545-41489894 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 186, 72 |
| Conread position: | 110-310 |
| Cow position: | chr7:35288220-35288021 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 179, 69 |
| Conread position: | 110-380 |
| Cow position: | chr7:993672-993938 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 110-385 |
| Cow position: | chr7:26890151-26890428 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 159, 69 |
| Conread position: | 110-415 |
| Cow position: | chr7:21242702-21242398 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 190, 9 |
| Conread position: | 110-454 |
| Cow position: | chr7:68779457-68779096 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 119-396 |
| Cow position: | chr7:30156890-30156612 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 181, 69 |
| Conread position: | 119-455 |
| Cow position: | chr7:53990169-53990522 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 151, 63 |
| Conread position: | 122-387 |
| Cow position: | chr7:3729483-3729744 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 144, 136 |
| Conread position: | 126-450 |
| Cow position: | chr7:53014911-53015253 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 58, 170 |
| Conread position: | 142-453 |
| Cow position: | chr7:41870459-41870168 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 203, 39 |
| Conread position: | 220-455 |
| Cow position: | chr7:1736665-1736415 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 108, 79 |
Show alignments to all cow chromosomes.