Cow genome map
| Conread name: | rnca04b_c8.y1 |
| Conread position: | 3-454 |
| Cow position: | chr8:12664545-12664072 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 305 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 4-348 |
| Cow position: | chr8:13735136-13735469 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 4-452 |
| Cow position: | chr8:25542097-25542545 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 228, 10 |
| Conread position: | 8-335 |
| Cow position: | chr8:53426817-53427141 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 9-339 |
| Cow position: | chr8:45161878-45161543 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 172 |
| Conread position: | 9-345 |
| Cow position: | chr8:45693896-45693562 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 215 |
| Conread position: | 9-368 |
| Cow position: | chr8:42466894-42467241 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 96 |
| Conread position: | 39-406 |
| Cow position: | chr8:23766826-23766471 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 39-455 |
| Cow position: | chr8:8904977-8904555 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 19 |
| Conread position: | 45-455 |
| Cow position: | chr8:42658928-42658510 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 250, 41 |
| Conread position: | 76-373 |
| Cow position: | chr8:11590200-11590488 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 111 |
| Conread position: | 82-368 |
| Cow position: | chr8:47884573-47884869 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 135, 7 |
| Conread position: | 85-406 |
| Cow position: | chr8:38607961-38607639 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 100 |
| Conread position: | 90-411 |
| Cow position: | chr8:48783604-48783921 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 99-453 |
| Cow position: | chr8:27924713-27925071 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 100-454 |
| Cow position: | chr8:44077442-44077071 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 105-368 |
| Cow position: | chr8:33429509-33429766 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 180, 77 |
| Conread position: | 108-368 |
| Cow position: | chr8:11970979-11970718 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 111, 74 |
| Conread position: | 110-363 |
| Cow position: | chr8:61036302-61036057 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 226, 72 |
| Conread position: | 110-368 |
| Cow position: | chr8:19229390-19229651 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 185, 77 |
| Conread position: | 110-452 |
| Cow position: | chr8:44037149-44036814 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 241, 12 |
| Conread position: | 110-455 |
| Cow position: | chr8:23216373-23216705 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 229, 71 |
| Conread position: | 110-455 |
| Cow position: | chr8:45317510-45317172 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 229, 71 |
| Conread position: | 110-455 |
| Cow position: | chr8:45448043-45448402 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 172 |
| Conread position: | 114-397 |
| Cow position: | chr8:42162059-42161776 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 170, 65 |
| Conread position: | 126-455 |
| Cow position: | chr8:32930134-32930455 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 134-455 |
| Cow position: | chr8:24421168-24420838 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 211, 50 |
| Conread position: | 144-452 |
| Cow position: | chr8:45188708-45189019 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 144-453 |
| Cow position: | chr8:8596270-8595947 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 151-358 |
| Cow position: | chr8:9264637-9264443 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 196, 36 |
| Conread position: | 201-405 |
| Cow position: | chr8:12544237-12544034 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 132, 22 |
Show alignments to all cow chromosomes.