Cow genome map
| Conread name: | rnca04b_c8.y1 |
| Conread position: | 1-229 |
| Cow position: | chr9:6973220-6973449 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 180 |
| Conread position: | 3-310 |
| Cow position: | chr9:23400780-23401084 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 9-277 |
| Cow position: | chr9:52569579-52569847 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 171 |
| Conread position: | 9-368 |
| Cow position: | chr9:34107714-34107358 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 39 |
| Conread position: | 9-384 |
| Cow position: | chr9:13219508-13219879 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 277, 27 |
| Conread position: | 9-449 |
| Cow position: | chr9:20310566-20310119 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 91 |
| Conread position: | 9-453 |
| Cow position: | chr9:64118012-64118444 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 101 |
| Conread position: | 9-455 |
| Cow position: | chr9:6111779-6111348 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 43 |
| Conread position: | 10-336 |
| Cow position: | chr9:4027948-4027626 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 11-455 |
| Cow position: | chr9:6756712-6757172 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 310 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 35, 79 |
| Conread position: | 12-238 |
| Cow position: | chr9:3579940-3579718 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 19-177 |
| Cow position: | chr9:39991813-39991970 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 20-343 |
| Cow position: | chr9:18835882-18836189 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 31-256 |
| Cow position: | chr9:240914-240690 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 32-448 |
| Cow position: | chr9:31776124-31776547 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 133, 71 |
| Conread position: | 42-455 |
| Cow position: | chr9:14962256-14961824 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 43-451 |
| Cow position: | chr9:26713115-26712719 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 214, 44 |
| Conread position: | 44-300 |
| Cow position: | chr9:26103410-26103155 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 44-393 |
| Cow position: | chr9:26237304-26237653 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 70 |
| Conread position: | 71-277 |
| Cow position: | chr9:17527544-17527337 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 173, 38 |
| Conread position: | 79-406 |
| Cow position: | chr9:4983991-4984314 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 40 |
| Conread position: | 87-250 |
| Cow position: | chr9:28002389-28002552 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 118, 95 |
| Conread position: | 93-455 |
| Cow position: | chr9:8969810-8969441 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 249 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 110-426 |
| Cow position: | chr9:3802757-3803067 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 175, 69 |
| Conread position: | 110-455 |
| Cow position: | chr9:28626762-28626426 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 241, 71 |
| Conread position: | 111-455 |
| Cow position: | chr9:34990911-34991251 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 221, 24 |
| Conread position: | 114-455 |
| Cow position: | chr9:54359851-54360209 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 181, 65 |
| Conread position: | 126-455 |
| Cow position: | chr9:10321084-10321424 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 137, 62 |
| Conread position: | 144-455 |
| Cow position: | chr9:15071809-15072117 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 176, 37 |
| Conread position: | 203-368 |
| Cow position: | chr9:39992268-39992438 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
Show alignments to all cow chromosomes.