Cow genome map
| Conread name: | rnmm31c_l2.y1 |
| Conread position: | 42-462 |
| Cow position: | chr29:21177239-21176820 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 10 |
| Conread position: | 44-462 |
| Cow position: | chr29:21208032-21207615 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 47-462 |
| Cow position: | chr29:21188461-21188047 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 5 |
| Conread position: | 48-591 |
| Cow position: | chr29:20069257-20068714 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 200, 190 |
| Conread position: | 52-419 |
| Cow position: | chr29:20229082-20229449 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 201, 205 |
| Conread position: | 52-430 |
| Cow position: | chr29:18704705-18704327 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 52-434 |
| Cow position: | chr29:19993206-19992824 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 52-434 |
| Cow position: | chr29:20003975-20003593 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 52-434 |
| Cow position: | chr29:20031497-20031115 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 52-435 |
| Cow position: | chr29:19979783-19979402 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 52-449 |
| Cow position: | chr29:20020406-20020009 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 52-475 |
| Cow position: | chr29:21249383-21248955 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 47 |
| Conread position: | 52-577 |
| Cow position: | chr29:18686732-18686210 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 224, 203 |
| Conread position: | 52-577 |
| Cow position: | chr29:18715339-18714817 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 218, 213 |
| Conread position: | 56-475 |
| Cow position: | chr29:21201956-21202377 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 52, 43 |
| Conread position: | 63-591 |
| Cow position: | chr29:20217423-20216892 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 143, 128 |
| Conread position: | 64-461 |
| Cow position: | chr29:18741783-18741386 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 134, 128 |
| Conread position: | 64-461 |
| Cow position: | chr29:21229430-21229827 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 64-464 |
| Cow position: | chr29:20191962-20192359 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 64-474 |
| Cow position: | chr29:21441345-21440936 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 132, 123 |
| Conread position: | 64-577 |
| Cow position: | chr29:19938272-19938785 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 389, 418 |
| Conread position: | 64-577 |
| Cow position: | chr29:21464080-21464593 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 240, 248 |
| Conread position: | 64-577 |
| Cow position: | chr29:21487498-21488011 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 241, 248 |
| Conread position: | 64-588 |
| Cow position: | chr29:19961598-19962122 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 134, 124 |
| Conread position: | 64-590 |
| Cow position: | chr29:18776424-18776950 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 241, 250 |
| Conread position: | 64-590 |
| Cow position: | chr29:19913801-19914327 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 325 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 64-591 |
| Cow position: | chr29:18771001-18771525 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 312 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 64-591 |
| Cow position: | chr29:21482045-21482569 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 65-591 |
| Cow position: | chr29:21345457-21345980 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 413, 236 |
| Conread position: | 66-590 |
| Cow position: | chr29:21327836-21328360 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 67-463 |
| Cow position: | chr29:19901142-19901540 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 136, 125 |
| Conread position: | 109-430 |
| Cow position: | chr29:18726425-18726104 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 196, 201 |
Show alignments to all cow chromosomes.