Cow genome map
| Conread name: | rnmm31c_l2.y1 |
| Conread position: | 8-577 |
| Cow position: | chr7:54131282-54131852 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 335 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 307 |
| Conread position: | 18-577 |
| Cow position: | chr7:32774180-32773622 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 334 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 48-590 |
| Cow position: | chr7:11617695-11617156 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 332 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 70, 64 |
| Conread position: | 49-426 |
| Cow position: | chr7:8766415-8766792 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 50-589 |
| Cow position: | chr7:32802176-32802717 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 338 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 52-430 |
| Cow position: | chr7:8793953-8794331 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 52-434 |
| Cow position: | chr7:8730893-8731275 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 52-434 |
| Cow position: | chr7:32718207-32718587 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 48 |
| Conread position: | 52-486 |
| Cow position: | chr7:8781670-8782100 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 52-577 |
| Cow position: | chr7:32688003-32688528 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 305 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 52-577 |
| Cow position: | chr7:32730513-32731038 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 431, 414 |
| Conread position: | 52-577 |
| Cow position: | chr7:32741590-32742115 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 52-590 |
| Cow position: | chr7:7080173-7080714 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 427 |
| Conread position: | 52-590 |
| Cow position: | chr7:58411839-58411301 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 57-421 |
| Cow position: | chr7:11659261-11659625 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 291, 309 |
| Conread position: | 57-580 |
| Cow position: | chr7:54143565-54144088 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 153, 140 |
| Conread position: | 64-430 |
| Cow position: | chr7:11610759-11610393 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 132, 139 |
| Conread position: | 64-586 |
| Cow position: | chr7:54056267-54056789 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 319 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 67-577 |
| Cow position: | chr7:27947317-27946807 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 67-586 |
| Cow position: | chr7:11628583-11628064 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 325 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 136, 124 |
| Conread position: | 68-426 |
| Cow position: | chr7:7197124-7196766 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 68-590 |
| Cow position: | chr7:32785753-32786277 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 330 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 70-430 |
| Cow position: | chr7:54081031-54080671 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 70-434 |
| Cow position: | chr7:32757037-32757401 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 70-435 |
| Cow position: | chr7:54046540-54046175 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 119, 110 |
| Conread position: | 70-447 |
| Cow position: | chr7:7225132-7224755 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-577 |
| Cow position: | chr7:32747749-32748256 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 73-429 |
| Cow position: | chr7:7215883-7215528 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 73-435 |
| Cow position: | chr7:7292348-7292710 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 160-584 |
| Cow position: | chr7:26833365-26832941 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 99 |
| Conread position: | 160-584 |
| Cow position: | chr7:26857412-26857836 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 99 |
| Conread position: | 200-577 |
| Cow position: | chr7:26873210-26872833 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 331, 323 |
Show alignments to all cow chromosomes.