Cow genome map
| Conread name: | rova028_g6.y1 |
| Conread position: | 128-370 |
| Cow position: | chr1:52774554-52774805 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 139-346 |
| Cow position: | chr1:67319346-67319144 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 40 |
| Conread position: | 178-362 |
| Cow position: | chr1:79278529-79278710 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 178-468 |
| Cow position: | chr1:57969130-57969419 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 183-362 |
| Cow position: | chr1:56233116-56232932 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 50, 140 |
| Conread position: | 189-352 |
| Cow position: | chr1:13456052-13455877 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 192-372 |
| Cow position: | chr1:74084295-74084475 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 192-466 |
| Cow position: | chr1:6166143-6165880 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 48 |
| Conread position: | 192-467 |
| Cow position: | chr1:95765190-95765473 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 193-331 |
| Cow position: | chr1:58341513-58341364 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 145 |
| Conread position: | 193-340 |
| Cow position: | chr1:94226649-94226802 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 193-473 |
| Cow position: | chr1:63905578-63905850 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 194-346 |
| Cow position: | chr1:30413486-30413325 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 194-346 |
| Cow position: | chr1:89835130-89834975 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 197-467 |
| Cow position: | chr1:57635358-57635077 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 201-375 |
| Cow position: | chr1:57264103-57264275 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 201-468 |
| Cow position: | chr1:102825923-102826194 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 217-461 |
| Cow position: | chr1:39702703-39702455 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 217-467 |
| Cow position: | chr1:22615754-22616007 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 220-468 |
| Cow position: | chr1:10881683-10881431 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 222-468 |
| Cow position: | chr1:15956604-15956350 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 224-467 |
| Cow position: | chr1:98023529-98023773 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 154 |
| Conread position: | 249-468 |
| Cow position: | chr1:4385189-4384958 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 254-469 |
| Cow position: | chr1:32072233-32072455 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 139, 123 |
| Conread position: | 290-436 |
| Cow position: | chr1:7631040-7630895 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 134, 91 |
Show alignments to all cow chromosomes.