Cow genome map


           Conread name:
           rova028_g6.y1
        

               Conread position:
               94-332
               

               Cow position:
               chr13:17981789-17982027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               94-343
               

               Cow position:
               chr13:4546351-4546603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               135, 39
               

               Conread position:
               101-352
               

               Cow position:
               chr13:52379750-52379499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               134-385
               

               Cow position:
               chr13:46637103-46636840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 161
               

               Conread position:
               190-347
               

               Cow position:
               chr13:4208730-4208564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 126
               

               Conread position:
               193-468
               

               Cow position:
               chr13:14063433-14063158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               6, 104
               

               Conread position:
               194-340
               

               Cow position:
               chr13:9125762-9125919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               194-354
               

               Cow position:
               chr13:16014907-16015067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               97, 42
               

               Conread position:
               195-363
               

               Cow position:
               chr13:52284902-52285084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 133
               

               Conread position:
               198-340
               

               Cow position:
               chr13:18243959-18244102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               201-468
               

               Cow position:
               chr13:25926891-25927150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               288-468
               

               Cow position:
               chr13:53069659-53069839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               138, 47
               
Show alignments to all cow chromosomes.