Cow genome map


           Conread name:
           rova028_g6.y1
        

               Conread position:
               81-326
               

               Cow position:
               chr2:79212750-79212996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               94-319
               

               Cow position:
               chr2:25056939-25056711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               94-346
               

               Cow position:
               chr2:717510-717758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               103-467
               

               Cow position:
               chr2:53496914-53497251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               129-391
               

               Cow position:
               chr2:14749562-14749286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               136-358
               

               Cow position:
               chr2:11706369-11706131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               147-391
               

               Cow position:
               chr2:36044410-36044666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               188-369
               

               Cow position:
               chr2:469555-469368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               189-424
               

               Cow position:
               chr2:40492272-40492036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 197
               

               Conread position:
               189-468
               

               Cow position:
               chr2:32408593-32408866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               199, 44
               

               Conread position:
               190-468
               

               Cow position:
               chr2:42309654-42309956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               10, 105
               

               Conread position:
               192-342
               

               Cow position:
               chr2:32243887-32244046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 131
               

               Conread position:
               193-330
               

               Cow position:
               chr2:40680031-40679883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               194-346
               

               Cow position:
               chr2:76313970-76314121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               97, 109
               

               Conread position:
               197-364
               

               Cow position:
               chr2:26339929-26340092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               205-362
               

               Cow position:
               chr2:29734391-29734220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               206-409
               

               Cow position:
               chr2:25217193-25216976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               224-472
               

               Cow position:
               chr2:46745782-46745528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 131
               
Show alignments to all cow chromosomes.