Cow genome map
| Conread name: | rova028_g6.y1 |
| Conread position: | 79-468 |
| Cow position: | chrX:42530434-42530812 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 101-315 |
| Cow position: | chrX:18248311-18248102 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 133, 15 |
| Conread position: | 124-346 |
| Cow position: | chrX:25281473-25281708 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 126-442 |
| Cow position: | chrX:905335-905028 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 59 |
| Conread position: | 127-338 |
| Cow position: | chrX:18293923-18293700 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 199 |
| Conread position: | 127-358 |
| Cow position: | chrX:4043859-4044102 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 196 |
| Conread position: | 139-323 |
| Cow position: | chrX:2186240-2186041 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 142-429 |
| Cow position: | chrX:20129006-20129286 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 185-346 |
| Cow position: | chrX:30832916-30833078 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 113 |
| Conread position: | 185-346 |
| Cow position: | chrX:35268813-35268650 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 185-354 |
| Cow position: | chrX:27394089-27394262 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 189-468 |
| Cow position: | chrX:16284018-16284302 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 195 |
| Conread position: | 189-468 |
| Cow position: | chrX:29032336-29032058 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 192-408 |
| Cow position: | chrX:37138053-37138268 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 133 |
| Conread position: | 193-332 |
| Cow position: | chrX:25283229-25283372 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 196-468 |
| Cow position: | chrX:44961666-44961385 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 197-333 |
| Cow position: | chrX:42855329-42855181 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 201-331 |
| Cow position: | chrX:42247272-42247409 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 201-360 |
| Cow position: | chrX:4768657-4768496 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 203-346 |
| Cow position: | chrX:32870872-32871026 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 206-468 |
| Cow position: | chrX:20168115-20167826 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 222-352 |
| Cow position: | chrX:6563398-6563266 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 223-468 |
| Cow position: | chrX:9954026-9953792 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 230-466 |
| Cow position: | chrX:22624359-22624130 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 106 |
| Conread position: | 231-392 |
| Cow position: | chrX:48578293-48578141 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 60, 107 |
| Conread position: | 232-447 |
| Cow position: | chrX:24132275-24132491 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 232-449 |
| Cow position: | chrX:33519494-33519270 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 160 |
| Conread position: | 232-468 |
| Cow position: | chrX:9855177-9854951 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 301-467 |
| Cow position: | chrX:10394490-10394316 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 125, 0 |
Show alignments to all cow chromosomes.