Cow genome map


           Conread name:
           rpfco0133_j17.y1
        

               Conread position:
               11-305
               

               Cow position:
               chr16:14385354-14385651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               176, 89
               

               Conread position:
               17-305
               

               Cow position:
               chr16:49142145-49141850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 87
               

               Conread position:
               39-305
               

               Cow position:
               chr16:1957788-1957524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               65-298
               

               Cow position:
               chr16:15974368-15974130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               97-305
               

               Cow position:
               chr16:49388637-49388860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               99-305
               

               Cow position:
               chr16:5363350-5363563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               98, 85
               

               Conread position:
               193-305
               

               Cow position:
               chr16:31978592-31978480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.