Cow genome map
| Conread name: | rpgl19_p16.y1 |
| Conread position: | 1-254 |
| Cow position: | chr5:54791731-54791984 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 1-254 |
| Cow position: | chr5:57481637-57481891 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 1-272 |
| Cow position: | chr5:3786829-3786547 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 1-272 |
| Cow position: | chr5:55628893-55628619 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 1-272 |
| Cow position: | chr5:64781114-64781387 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 3-271 |
| Cow position: | chr5:18400788-18401058 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 4-264 |
| Cow position: | chr5:46004953-46005215 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 4-268 |
| Cow position: | chr5:10919724-10919460 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 8-264 |
| Cow position: | chr5:27055778-27056042 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 8-264 |
| Cow position: | chr5:39245915-39246174 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 39 |
| Conread position: | 8-273 |
| Cow position: | chr5:41960836-41961097 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 8-273 |
| Cow position: | chr5:45701213-45700941 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 177 |
| Conread position: | 9-264 |
| Cow position: | chr5:10775372-10775631 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 11-264 |
| Cow position: | chr5:23669233-23669482 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 11-264 |
| Cow position: | chr5:41527891-41528136 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 67 |
| Conread position: | 11-264 |
| Cow position: | chr5:49757776-49758027 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 11-264 |
| Cow position: | chr5:51770054-51770306 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 195, 170 |
| Conread position: | 12-264 |
| Cow position: | chr5:1341139-1341394 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 12-264 |
| Cow position: | chr5:4070102-4069858 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 204, 48 |
| Conread position: | 12-272 |
| Cow position: | chr5:30580232-30579957 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 15-264 |
| Cow position: | chr5:32947950-32947694 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 36-272 |
| Cow position: | chr5:3503252-3503490 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 59-274 |
| Cow position: | chr5:49591251-49591473 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 138 |
| Conread position: | 88-272 |
| Cow position: | chr5:29766700-29766512 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 112-272 |
| Cow position: | chr5:7274621-7274459 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 90 |
Show alignments to all cow chromosomes.