Cow genome map
| Conread name: | rpigcb_11866.y1 | 
| Conread position: | 1-316 | 
| Cow position: | chr6:6163407-6163099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 102 | 
| Conread position: | 6-311 | 
| Cow position: | chr6:43330150-43330446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 85 | 
| Conread position: | 9-170 | 
| Cow position: | chr6:40031317-40031166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 45, 86 | 
| Conread position: | 9-199 | 
| Cow position: | chr6:67098493-67098318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 45, 79 | 
| Conread position: | 9-311 | 
| Cow position: | chr6:47848645-47848933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 12-294 | 
| Cow position: | chr6:13405490-13405218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 79 | 
| Conread position: | 13-250 | 
| Cow position: | chr6:38988560-38988779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 41, 50 | 
| Conread position: | 13-317 | 
| Cow position: | chr6:16596244-16595951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 80 | 
| Conread position: | 14-316 | 
| Cow position: | chr6:49815464-49815171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 79 | 
| Conread position: | 14-329 | 
| Cow position: | chr6:2087783-2087475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 63 | 
| Conread position: | 35-311 | 
| Cow position: | chr6:49626069-49625805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 56 | 
| Conread position: | 46-327 | 
| Cow position: | chr6:58951897-58952165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 56-317 | 
| Cow position: | chr6:41414128-41414381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 135, 40 | 
Show alignments to all cow chromosomes.
