Cow genome map


           Conread name:
           rpigcb_11866.y1
        

               Conread position:
               2-216
               

               Cow position:
               chr8:55343129-55342926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               2-329
               

               Cow position:
               chr8:27535321-27535633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               9-292
               

               Cow position:
               chr8:26196132-26196404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               9-317
               

               Cow position:
               chr8:16758283-16758578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               45, 62
               

               Conread position:
               9-332
               

               Cow position:
               chr8:1385128-1384815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 83
               

               Conread position:
               13-329
               

               Cow position:
               chr8:9994988-9994691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               14-320
               

               Cow position:
               chr8:13696477-13696768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               15-317
               

               Cow position:
               chr8:19823039-19823329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               15-329
               

               Cow position:
               chr8:53004357-53004664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               16-329
               

               Cow position:
               chr8:38276159-38275854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               35-316
               

               Cow position:
               chr8:37169444-37169719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               56-238
               

               Cow position:
               chr8:33855309-33855137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 0
               
Show alignments to all cow chromosomes.