Cow genome map


           Conread name:
           rpigcb_13478.y1
        

               Conread position:
               3-340
               

               Cow position:
               chr1:85529423-85529758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               8-339
               

               Cow position:
               chr1:75744262-75743931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               11-340
               

               Cow position:
               chr1:90604851-90605175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               19-305
               

               Cow position:
               chr1:63260515-63260796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               25-281
               

               Cow position:
               chr1:31964128-31964381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               25-339
               

               Cow position:
               chr1:3340648-3340331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               25-340
               

               Cow position:
               chr1:28877074-28876763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               58-334
               

               Cow position:
               chr1:55429300-55429569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               242, 49
               

               Conread position:
               67-349
               

               Cow position:
               chr1:96298344-96298620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 0
               
Show alignments to all cow chromosomes.