Cow genome map


           Conread name:
           rpigcb_13478.y1
        

               Conread position:
               1-329
               

               Cow position:
               chr6:2088436-2088110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               1-339
               

               Cow position:
               chr6:7175346-7175683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               12-340
               

               Cow position:
               chr6:25223506-25223832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 61
               

               Conread position:
               25-378
               

               Cow position:
               chr6:39998580-39998923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               30-340
               

               Cow position:
               chr6:16737767-16737461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               58-334
               

               Cow position:
               chr6:29077445-29077174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               241, 62
               

               Conread position:
               61-305
               

               Cow position:
               chr6:39088485-39088247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               61-333
               

               Cow position:
               chr6:57309084-57308819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               133-329
               

               Cow position:
               chr6:5302751-5302946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 73
               

               Conread position:
               142-339
               

               Cow position:
               chr6:50446268-50446465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               153, 173
               
Show alignments to all cow chromosomes.