Cow genome map


           Conread name:
           rpigcb_9829.y1
        

               Conread position:
               221-466
               

               Cow position:
               chr12:30064947-30064694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 67
               

               Conread position:
               221-483
               

               Cow position:
               chr12:28559306-28559028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               221-536
               

               Cow position:
               chr12:5797549-5797865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               115, 161
               

               Conread position:
               225-489
               

               Cow position:
               chr12:5146822-5146558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 80
               

               Conread position:
               250-511
               

               Cow position:
               chr12:15258739-15259003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 83
               

               Conread position:
               331-509
               

               Cow position:
               chr12:1883611-1883800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               344-511
               

               Cow position:
               chr12:42966872-42966706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 28
               
Show alignments to all cow chromosomes.