Cow genome map


           Conread name:
           rpigcb_9829.y1
        

               Conread position:
               221-450
               

               Cow position:
               chr17:41811899-41811662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               116, 51
               

               Conread position:
               221-493
               

               Cow position:
               chr17:4330697-4330434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               225-522
               

               Cow position:
               chr17:25145242-25145536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               144, 69
               

               Conread position:
               228-501
               

               Cow position:
               chr17:42435563-42435836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               233-492
               

               Cow position:
               chr17:9911833-9911566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               237-540
               

               Cow position:
               chr17:13989102-13989418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               238-516
               

               Cow position:
               chr17:23246277-23245991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 56
               

               Conread position:
               252-501
               

               Cow position:
               chr17:27429634-27429372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               290-526
               

               Cow position:
               chr17:22232255-22232496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               323-481
               

               Cow position:
               chr17:12538856-12539022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 0
               
Show alignments to all cow chromosomes.