Cow genome map


           Conread name:
           rpigcb_9829.y1
        

               Conread position:
               199-528
               

               Cow position:
               chr3:44254393-44254725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               101, 26
               

               Conread position:
               221-476
               

               Cow position:
               chr3:9074320-9074567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               221-530
               

               Cow position:
               chr3:58865447-58865757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               90, 71
               

               Conread position:
               224-501
               

               Cow position:
               chr3:1300238-1299963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 121
               

               Conread position:
               224-511
               

               Cow position:
               chr3:16077899-16077618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               224-517
               

               Cow position:
               chr3:29507604-29507311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               233-516
               

               Cow position:
               chr3:37186835-37186552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 6
               

               Conread position:
               236-552
               

               Cow position:
               chr3:48629583-48629908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               237-510
               

               Cow position:
               chr3:70754365-70754086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 130
               

               Conread position:
               237-539
               

               Cow position:
               chr3:63203440-63203138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               54, 37
               
Show alignments to all cow chromosomes.